Cyprinodon variegatus (sheepshead minnow): 107095213
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Entry
107095213 CDS
T06110
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
cvg04510
Focal adhesion
cvg04540
Gap junction
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107095213 (pdgfa)
04020 Calcium signaling pathway
107095213 (pdgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107095213 (pdgfa)
04540 Gap junction
107095213 (pdgfa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107095213 (pdgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cvg04052
]
107095213 (pdgfa)
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107095213 (pdgfa)
Cytokines and neuropeptides [BR:
cvg04052
]
Cytokines
Growth factors (RTK binding)
107095213 (pdgfa)
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Growth factors/receptors
107095213 (pdgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
EF-hand_Zip
Motif
Other DBs
NCBI-GeneID:
107095213
NCBI-ProteinID:
XP_015246696
Ensembl:
ENSCVAG00000004106
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MRATICCFLLWTTYLLATAEKEAEFPQELIDRLSNSEIHSISDLQRLLEIDSVGTGNDVI
EEHKHHKHHNHHKNSSNHHGYYNELKSSQLHSRRKRSLVEEAVPAACKTRTVIYEIPRSQ
VDSTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHLDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacaatttgttgcttcctgctgtggacgacgtacctattggccactgctgag
aaggaagcagagtttccccaggagctgatcgatcggctctccaacagtgaaatccacagc
atcagcgacctccagcggctactggagattgactccgtaggtacgggaaacgatgttatc
gaggagcacaagcatcacaagcaccacaatcatcataagaactcctccaatcatcatggt
tactacaatgaactgaagagctcgcagctacacagccgacgcaagaggagtcttgttgaa
gaagccgtccctgcggcgtgcaagacgaggacagtgatctacgagatcccccgcagccag
gtggattccacgtctgccaacttcctgatatggccaccctgtgtggaggtgaagcgctgc
acaggctgctgcaacaccagcaacatgcgctgtcacccgtcccgcaagcaccaccgcaca
gttaaggtagccaaggtggagtacgtgagaaggagacccaagctgaaggaggtctttgtg
cggttagaggaccacctggagtgtgtttgcacatcacaacatcatgtggtagaacactta
gatgcagagacagtagatgtgaggtga
DBGET
integrated database retrieval system
