Cyprinodon variegatus (sheepshead minnow): 107097223
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Entry
107097223 CDS
T06110
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107097223
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107097223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
107097223
NCBI-ProteinID:
XP_015249777
Ensembl:
ENSCVAG00000005822
UniProt:
A0A3Q2CHH1
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MKDTNAEVGGKTDQSGKPEKQQTWIKKIIKKRVCTTFVEDSFSNGALCQCGGAREAHSSV
ALGDYFSTAIVNHWDSAQHSSEYPTDAFGEVKFGGASKRHSYFVRLSWDTKPLVVYSLMT
NHWKLPKPNLVVSVVGGEGRTKVKTWVREVIRQGLVKASQRAGAWILTTGLREGVGKCVG
EAVRDHATAASSDSLNKVLAVGIAPWGLVHQREKLVNPQGSFPAEYFVQNPVRDSCSLDK
NYQAFLLVDDGSVGRRGGDMIFRTKLEDYISHQPTGIWGSGTIDIPVLCMLISGDASLLE
RVDLSLKNSKPWLVLAGSGGLADFLTDLLENVSSAPVLQSSSEGDGEPGPSVDLKEKVSE
RVKKHFPMESDTDKLIERALSIYQNRDLILIHHGEQESPTDFDTVLLKALVGASKHRASV
EDSPYSEELKLAVAWNRVDIAKSELFNGDINWEYDDLIDSMTDVLINDKPQFVQLFTENG
LNIAQYLTYGRLEQLYSSIPDSTLLYQLLQRRLVVRLGTTTTVPAAPSEPNSPSKYPDNP
VSGPMTDITLFEVSGVLDLLWGDICQPLYYDVLGIADISSKRKALKRASKLLREDRRYQN
RRCSFPWASLFIWAVLQNRSEMATFFWEMAGETVLTALSGCKILRELSKLESENEMKLSM
KELALTFENRAHDIFSSCYRSNENRSFDLLIMKSPVWGGTTCLQMGMSADARTFFSHDGV
QSLLSQIWWGDMQRDTEVWKLLLTFFCPFLCYTDLISFRETINQEEEQNGEDKPSQDAHS
HYGTTVFSYSEIKDMEADGEAHIPGTPISRDVPEIYTPPKRPFILSRWRQFWFAPVTAFM
GNVLMYFLFLLLYAYVLLVDFKPPPPSGPAITEYILYFWVFTMVCEEIRETFFSGVMNWR
QRLRVYIQDVWNKFDLLAISLFILGLVGRMFWWTLEFGREVLCVGFMVFTLRLIHIFAIH
KELGPKIIIVGKMVKDVFFFLFFLGVWIMAYGVTNQALLYSYDPELDRILRRVFYRPYLH
IYGQIPVEEVDVKKDWDVECTTNLTLIEGGAEPCRTSLSNWLVVILLVVYLLVTNILLIN
LLIAMFSNTFTEVQANSESYWKFQRYNLIVQYHSRPSLAPPFIILSHINLFIKRKIRKVP
SVKVQHFVLQLNRKDANRLMTWETIQKEDFLSAQNKIQKSSDSERLKRMSVKMDGVAKHM
SENRDFDQRLRVLENEMENCSNALRWIVDTLAQSGTFKPPRPPPTFRDGVPSSSSSS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacaaacgcagaagttggaggaaaaacggaccaaagcggtaaacctgagaag
cagcagacttggatcaaaaagatcatcaagaaaagagtctgcaccacctttgtggaggat
tcattcagtaatggagcactatgtcagtgtggtggagcgagagaagcccactcctccgtg
gctctcggcgactatttcagcacagccattgtgaaccactgggacagcgcccaacactcg
tctgaatatccaaccgatgcttttggagaagtgaaatttggaggagccagcaagagacac
agctattttgtccgcctgtcatgggacaccaaaccgcttgtcgtctacagcttgatgacg
aatcactggaaactccccaaaccaaacctggtggtttctgttgtggggggagagggcaga
acaaaggtgaagacctgggtgagggaagtcatcagacagggactcgtgaaagcttcacaa
agagcaggggcgtggatcctgacaacaggcctacgtgaaggcgttggcaagtgtgttggt
gaggcagttcgagatcacgctaccgcagcctcatcagactccctcaacaaggtgttggct
gtaggcatcgctccatggggcttagtacaccaacgggagaaactcgtaaaccctcagggc
agctttcctgcagagtactttgtacaaaacccagttcgggattcctgcagtctggacaaa
aactaccaggccttcctgctggtggatgatgggagtgttggccgcagaggtggagacatg
atcttcagaaccaaactggaggactacatctcccaccagcccacaggaatatggggtagt
ggcacaattgacatccctgttctttgcatgttgatatcaggagacgcaagccttttagag
agagtggatctttctctgaagaactcaaagccttggctggtgctggctggctctggaggc
cttgcagacttcctgacagatctcctggaaaatgtgtcctctgccccagttctccagtcc
tccagtgaaggggatggtgagcccggtccaagtgtggatctgaaagagaaagtttcagag
cgggtcaagaagcactttcctatggaatcagacactgacaaacttatagaaagggctcta
agtatctatcaaaacagagacctgattttaatccaccacggagagcaggagagcccaaca
gactttgacactgtcctcctgaaagctttggttggagcaagtaaacaccgtgcatcagtc
gaggacagtccttacagtgaagagcttaaactagcagttgcatggaaccgggtggacatt
gccaagagtgaacttttcaatggagacattaattgggagtatgatgacctgattgattcc
atgacggatgtcctgatcaatgataaaccccagtttgtgcagcttttcactgagaatggc
ctaaacattgcacaatacctgacttatggcagactggaacagctttacagctctattcct
gattcaacgctgttataccagctgctgcagcgcagattagtggtcagacttggaactaca
acaacagtgcctgcagcacctagtgagccaaattcaccctctaaatatccagataaccct
gtgagtggaccaatgacagacataactctttttgaggtgtcaggtgtccttgatttattg
tggggtgatatctgccagccgttatactatgatgttttgggcatagcggatatcagttcc
aaaaggaaagctctcaagcgtgcaagtaagctgctgcgtgaagatcgcagatatcagaac
aggcgctgctctttcccctgggcttcactcttcatctgggctgttctgcagaaccgcagt
gaaatggccactttcttctgggagatggcaggagagacggtgcttactgctttaagtggc
tgtaaaatccttcgagaactgtccaagctggagtcggaaaatgaaatgaaactctctatg
aaagaattggccctcacgtttgagaaccgggcacatgatatcttcagctcttgctatcgc
agcaatgaaaatcgctcctttgatctgctgataatgaaatctcctgtttggggaggcacc
acctgtttacagatgggcatgagtgctgatgcaagaactttcttcagccatgatggagtg
cagtctctcttgtcccagatctggtggggtgacatgcagagagacacggaggtgtggaag
cttctgctcacttttttctgtcctttcctctgttacacagacttaatttctttcagggaa
acaattaaccaagaggaagaacaaaacggtgaagataagccaagtcaagatgcacacagt
cactatggaacaactgtcttctcttactctgaaattaaggacatggaagctgacggagag
gcccacattcccggaactcctatcagcagagatgtccctgaaatctacaccccaccaaag
cgtccgttcatattgtcccgctggcgtcagttctggtttgctccagtcacagccttcatg
gggaacgttttgatgtacttcctctttctcctcctgtatgcgtatgttctgttggtggac
ttcaagccgccacctccatctggtccagccataacggagtacattctgtacttctgggtc
ttcaccatggtgtgtgaggagataagagagaccttcttttcaggggtgatgaactggcgt
cagaggctccgagtctacattcaggatgtttggaataagtttgacctccttgctatatct
cttttcatcttgggattagttggcaggatgttttggtggactcttgagtttggaagggaa
gtcttgtgcgtgggcttcatggtcttcactcttcgtctcattcacatttttgccattcac
aaagagcttgggccaaaaattatcattgttggcaaaatggtgaaagatgtcttcttcttc
ctctttttcctgggagtgtggatcatggcgtatggcgtaacaaatcaggctttactttac
tcctacgatcctgagttagatcgtatccttcgtagagttttctacaggccttacctgcac
atatatggacagattcctgtggaggaggtagatgttaaaaaagattgggatgttgaatgc
acaaccaacctgacactgattgaaggaggtgcagaaccatgcagaacatcattgagtaac
tggttagttgtcattctgctggtcgtttaccttctggtaaccaacatccttctcatcaac
ctgctcattgcaatgtttagcaacactttcactgaagtgcaagcgaacagcgagtcttac
tggaagtttcaacgttacaacctgattgttcagtatcactccaggccgtcgctggctcct
cccttcatcatcctctcccacatcaatctctttatcaagaggaagatccgaaaagtgccg
tcagtcaaagttcagcactttgttttgcagttaaataggaaggatgccaacagattaatg
acatgggaaaccatccaaaaggaagattttctgtcggcccaaaacaaaattcagaaaagc
agcgactctgagaggcttaaaaggatgtcggtcaagatggatggtgttgctaaacatatg
agtgaaaacagagactttgaccagagacttcgggttctcgagaatgagatggaaaactgc
tcaaatgccctgaggtggattgtggatactttagctcaaagtggcacatttaagcccccc
cgaccgccacctacattcagagatggtgttcccagttcttccagttcatcgtaa
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