Cyprinodon variegatus (sheepshead minnow): 107097546
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Entry
107097546 CDS
T06110
Name
(RefSeq) intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107097546
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
107097546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122_C
Zn_ribbon_IFT122
TPR_IF140-IFT172
TPR_IFT80_172
TPR_GEMI5
zf-C3HC4_3
ANAPC3
TPR_7
TPR_COPA_B
TTC7_N
Motif
Other DBs
NCBI-GeneID:
107097546
NCBI-ProteinID:
XP_015250206
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MESMIRYIKVIGGPPGKEGLLVGLKNGAILKIFVDNPFPITLLKLSTSVRCLDMSASRNK
LAVVDEHNTLFVYDNNSKDLLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQ
KMQGFIVGYNGSKIFCLHVYSMSAVEVPQSAPMYQYLEQKMFKEAYQIACLGVTDSDWRD
LATEALEGLDFETAKKAFIRIRDLRYLELISSIEERKKRGENDNEMFLADVYAFQGKFRE
AAKLYKRSGHEPAMKKAVNMYADLCMFEHAQECAGVTDPKVSLKLITKQADWAKSSEEPR
TAAEMYLSAGEHMKAIDIIGEHGWADMLIGVARKLDKAERELLAKCAVYFKKLGHHGYAS
ETYSKMGDLKAFLQLHVETSHWEEAISLVKEHPQFNYDVYFPLALWFAENSHFDEAQEAF
NKAGLHNEAVKVLKQLTHNAMVENRFNDAAYYYWKLSMQCLDIAREKEDQRKEMLQKFES
FQHLAELYYVYRSIQLYTDEPFSSHMPETLFNICRFLLNNLTKDVPPGISKVNTLFALAK
QSRKLGAYKLARYAYEKLQELHLPSRFRESVELGSLTIHFKPFQDSKELIEDMMCYRCST
NNPLLQSSVCINCRQPFIYSASSYEVLPLVQFYLEEGISDEEALSLIDLEVPHTDEGHAQ
GHTTDRGDMQSMRIDDGLDYTEEDPFTATMSFEQGGSTFVPVKVSRSALRSMSRRDVLIK
RWPKPLKWEYFRSLLPDVSITMCPSCFKMFHSEDYELLVLQHTRCPYCRRPIDGHNGSTL
QQSRFSEFPSLS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaatctatgattcgttacatcaaagtgatcggtggtccgccaggcaaggagggtctg
ctggtgggcttaaagaacggagctatcctgaagatatttgtcgacaatcctttcccaata
acgctgctgaagctgtcaacatcagtgcgctgcctcgatatgagcgcgtcccgcaataaa
ctggctgtggtggatgaacataacactctcttcgtctatgacaacaacagcaaagatttg
ctttttcaggagcctaacgctaacagcgtagcctggaacacccagtgtgaggacatgctg
tgtttctctgggaacggctaccttaacatcaaggccagcaactttccagtgcaccagcag
aaaatgcagggctttatagtgggctacaacggctcgaaaatattctgcctccacgtctat
tccatgtctgctgtcgaggtgcctcagtcagcacccatgtaccaatacctggagcagaag
atgtttaaggaagcttatcagatcgcctgtctgggtgtgacagacagcgattggagggat
ttggccacagaagctctcgagggacttgactttgaaacagccaagaaggccttcattaga
atccgagatttgcgctacttggaactgatcagcagcattgaggagaggaagaagcggggc
gagaacgacaacgagatgttcctggcagacgtctatgccttccaggggaaattccgcgag
gctgcaaagctctacaaacgcagcggccacgaaccagccatgaagaaagctgtgaacatg
tacgccgacctgtgcatgttcgagcacgcccaggagtgtgcgggtgttacagacccaaag
gtctccctcaagctaataacaaagcaggcagattgggctaaaagcagcgaggagccccgg
acagcagctgagatgtatctgtcagcaggagaacacatgaaagctatagatattatcgga
gaacacggctgggctgacatgctaattggcgttgcacgtaagctggacaaggctgagcgt
gaactactggcaaagtgtgcggtgtacttcaagaagctgggacaccatggctatgcctca
gagacttattccaagatgggagacttaaaggcttttttgcaactacacgtggagacgagt
cactgggaagaggccatctccctggtgaaggagcacccacagttcaattatgacgtctat
ttccctctcgccctttggtttgcagaaaacagtcactttgatgaggcgcaagaagcattt
aacaaggctgggcttcataacgaagctgtaaaagtcctcaagcagcttacccacaatgca
atggtggagaacaggttcaacgatgcagcctactattactggaagctgtccatgcagtgt
ttggacatcgccagagaaaaggaagatcagaggaaggaaatgctgcagaagtttgagtct
tttcagcatcttgctgagctatattatgtctaccgctccattcagctctacacggatgaa
ccattcagttcccacatgccagagacgctcttcaacatatgcaggttcctattgaacaac
ctcaccaaggacgtaccgccaggaatttctaaagtcaacaccttgtttgcactggccaag
cagagtcgcaaactgggagcgtataagttagcccggtatgcctacgagaagctccaggag
ctgcaccttccttcacgtttcagggagtccgtagagctgggcagcctcaccattcacttc
aagcccttccaagacagtaaggagctgattgaggacatgatgtgctatcggtgctccaca
aacaacccccttcttcagagcagcgtgtgcatcaactgcaggcagcccttcatctactcc
gcttcatcatatgaggtgctgcctctggtgcagttttacctggaggagggtatcagtgac
gaggaggcgctgtccctcatagacctggaagttcctcacacagatgagggccatgcacaa
ggccacaccacagacagaggtgacatgcagtctatgagaatagatgacggtttggattat
acagaggaggatccatttacagccacaatgagctttgagcaagggggctccacctttgtc
cccgtcaaggtgagccgctcggcgctgcgctccatgagcagaagggacgtcctgatcaaa
cgctggcccaagcccctcaaatgggaatacttccgttccctgctgccggatgtgagcatc
accatgtgccccagctgcttcaagatgtttcacagtgaagactatgagctcctggtgctg
cagcacacccgctgcccttactgtcggcggccaattgacgggcacaatggatcgaccctc
caacagagccgattcagtgaatttccctcattgtcgtag
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