Cyprinodon variegatus (sheepshead minnow): 107097624
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Entry
107097624 CDS
T06110
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107097624
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Protocadherins
107097624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
107097624
NCBI-ProteinID:
XP_015250319
Ensembl:
ENSCVAG00000013045
UniProt:
A0A3Q2CY81
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MDSRQRKRSGGGTLWRIYLYLACIYSASAELRYSVLEEQDPGSVVGNIANDLSLNVQDIV
SRRLRVVSESPVEYFEVKQATGELIIKQRIDREQLCELSSSCSQKIQIILEHPLDIHRVV
VEIRDVNDNAPQFSTSNISLEVSEAAAQGTRFRLESAHDPDVDTNSLRSYRLAANDFFTL
NVETKSDGSKFPELVVNKALDRETQASFRLLLTAVDGGQPQKSGSTLLLIKILDVNDNAP
VFSEPVTKVTLLENVAQGTLVTKLNATDVDSGSNGEISFLFSKYTPERVLQLFSIDSKSG
EISVKGDVDYEKATSYHITVQARDGGDPAMEGSCNLIVDIIDVNDNAPQVTLMSATSSIS
EDSPKEKMIALITARDLDSGDNGKVTLTIPAGLPFKLNSAFDGHYSLITAGSLDRETVPE
YTVVIKATDAGSPPLTSQQTFVVTLLDVNDNAPSFSQPSYSVDIPENNLPSSPIAVVSAT
DADLGENAHISYSILPSMIQDSPISSYVYINPETGHIYSMRSLDHEKVNAFRIQVQARDA
GEPQRATNVTVHVFVVDVNDNAPMIVHPSYPKDKRLQLSVPPSVSTGHVINKLVAVDADS
GHNAWLFYSIAPGPNAGMFRIGVHTGELRTARKWAEEDEGSTYDITVIIQDNGDPPKSTS
VNITVTVDEKAKAVDVPSHPRHNHFYHHTGMSNITLYLIISLACVSGVAFITFLVLMVRC
LRHRGPGLGDSECCCYGRSRSSRYHQRPSKDLHLQLNSDGPIRYMEVVGGPQDPHTRTYR
PCYSTISSRSDFVFMKTPMLSHNNTLNMTLSRKNLMNSAIEQKPPNNDWRFTQGQRPGPS
GPHMPYGTHIRWTPKNGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATL
GPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQQALPPPQA
SAQAEPPKAAQTPASKKKSTKKEKK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggactccaggcagaggaagcgctccggaggagggacgctgtggaggatttacctctat
ctggcctgtatctactctgcctccgctgagctcagatattctgttttggaggaacaagat
ccggggtctgtggttggaaacatcgcgaatgatctgagccttaatgttcaggatatcgtc
agtaggaggctacgggtggtctctgagtcaccggtggagtattttgaagtgaaacaagca
actggtgaattaattattaaacaaagaattgacagagagcaactgtgtgaactgagttca
tcttgctcacaaaaaatccaaattatcctggagcatccactggatattcaccgagttgtt
gtggaaatccgggatgtgaacgataacgcgccgcagttttcaaccagcaatatttctctg
gaggtgtcagaggcggcggcgcagggcacacggttccgtttggagagtgcgcacgatcca
gacgtggatactaactccttacgatcttaccgtttggctgcaaatgacttctttacactg
aatgtggagactaagagtgatggcagcaagtttccagaactggtcgtgaataaagctctg
gacagggagacacaggcctcttttcgcctgttactcactgctgtggatgggggtcagccg
cagaaatctggctcaacacttctgctcattaaaattctggatgtaaatgacaatgcgccc
gtctttagtgagccagtgacaaaggtgacgttgttggaaaatgtcgcacagggcacttta
gttacaaaattaaacgcaactgacgttgattctggcagtaatggtgaaatatcattcctg
tttagtaaatacacaccagagcgtgttctccagctcttcagcatagactccaaaagcggg
gagatcagtgtgaagggggatgtggactatgagaaggccacatcttatcacattacagtg
caggccagagatgggggagaccctgccatggagggctcctgtaacctcatagtggacatc
attgatgtgaatgacaatgccccgcaggtgacactgatgtctgcaaccagctccatcagt
gaagattcacctaaagaaaaaatgattgctctcataactgctcgagacctggattctgga
gataatgggaaggttacattaaccatcccagcaggtctgccttttaaacttaattcagcc
tttgatggtcattatagtctgataactgctggcagccttgacagggagactgtcccagag
tacacagtggttattaaggcaactgacgctggctccccacccctcacatcccaacaaacc
tttgtcgtaacgctcctggatgtaaacgacaatgccccctccttctcccagccttcatac
tctgtggacatccctgaaaacaacctcccaagttctcctatagctgttgtttctgccacc
gatgctgacctgggtgagaatgctcatatctcctattccattcttcctagtatgatccag
gactctcccatctcatcttatgtgtacatcaacccagagactggccacatctacagcatg
cgctccctggaccatgagaaggttaatgctttccgcattcaggtgcaggccagggatgca
ggggagccccaacgggcaacaaatgtcactgtacatgtgtttgttgtagatgtgaatgac
aatgcaccaatgattgttcatccctcctaccctaaggacaaaagactccagctcagtgtg
cccccatctgttagcacaggccatgtcataaataaactggttgcagtggatgcagacagt
gggcacaatgcatggttgttttactctattgcaccaggaccaaacgctggcatgttccgt
attggggtccacactggagagctccgaacggcccgcaagtgggccgaagaagatgagggt
tctacttatgacataacagtcatcatccaggataatggggatccaccaaaatctacttct
gtgaatatcaccgtaaccgtggatgagaaggccaaagctgttgatgtcccttcacacccc
cgacacaaccacttctaccaccacactgggatgtctaacatcactttatatctcatcatc
tctctcgcatgtgtgtcaggtgtggctttcatcacttttctggttctcatggtgcgctgc
cttaggcaccgtggtccagggctgggagactctgaatgctgctgctatggccgcagcagg
tccagccgctaccatcagaggcccagtaaagacctacacctgcagctcaacagtgatggg
cccatacgatacatggaggtggtgggaggcccccaggatcctcacacacgcacctatcgg
ccctgctactccaccatatctagccgaagtgactttgtatttatgaagacacccatgctg
agtcataacaacacgctcaacatgacactcagtcggaagaacctaatgaactcagccatt
gagcaaaagccacccaacaatgactggcgtttcacacaaggacagagacctggaccaagc
ggtccccacatgccatacggtacacacatacgatggacgccgaagaatgggacaagggca
actggaggacctgaggtagccatgggaactggcccctggccgcagccccccaccgaagct
gagcagctccaggcacttatggcagcagctaacgaagtcagcgaagcgacggccaccctc
gggcccggcaccatgggcttgagcacccgctacagcccccagttcaccctgcagcacgtg
cccgactaccgccagaacgtctacatccccggcagcacggccaccctcacctccaatccc
cagcagcagcaggccacggcccagcaggccacacagcaggctctgcctccgcctcaggcc
tcggcacaggccgagcctccaaaggctgcccagaccccggcctccaagaagaagtccacc
aagaaggagaagaagtag
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integrated database retrieval system
