KEGG   Cyprinodon variegatus (sheepshead minnow): 107098427
Entry
107098427         CDS       T06110                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107098427 (ercc6l2)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    107098427 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 107098427
NCBI-ProteinID: XP_015251608
Ensembl: ENSCVAG00000011870
UniProt: A0A3Q2GI15
LinkDB
Position
Unknown
AA seq 1456 aa
MGDIQESTLGEEEQEAKGTSGKKLINSGSKQLIQEKPVFPGSSTDPMLSIPLDLSNEDRV
PYTINRYLRDYQREGIRFIYNNFMASTGCILGDDMGLGKTVQIIGFLAALLHKTGTWEDI
ENNRPQFLQTQLPSNQINPTKVFLIVAPLSVLYNWKDELNTWGYFQCVVVHGLRKEEELA
RIKNGRIEIALTTYETLRLCLDQFNKIDWFGVIVDEVHKIKNPNSQITQAMKQLRCKNRI
GLTGTILQNNLEELWCVMDWAKPGCLGSLGHFKNRFSDPIEQAQRHSATKRALATGRKTI
RALVRQISPFFLRRTKALIREQLPKKDDRVVYCSLTDFQQTVYQAVLDTEDVTLMLRSSE
KCDCQSGRTRRSCCYKTNSEGVCVKKLYFTYLAILRKVANHAALLQSTSSTSKKQERYVS
SVCAKVFQKFPDFVQRCKNEAFEALSDPMYSGKMKVLQKLLNYYLPKKDKVLIFSLSTRL
LDILESYCMAEGLDFSRLDGTTKSRERLQIVKDFNSSSHINLCLVSTMAGGLGLNFVGAN
VVVLFDPTWNPANDLQAIDRAYRIGQWRDVTVLRLISLGTVEEVIYLRQVYKQQLQCSVV
GKESARRYFEAVQGNCDHKGELFGLKNLFRLQIEGTCLTRRILEREGRVEAGVITTQTHK
QAEKEIKESKNEEHEDLPKEGTPSDDEEHAANIYVSKIPKGVLDFSSGSETDEELQGLKR
KASNSSAGHGSRSGKAANGPIPMSLLQHGFSKVLETVKKRQQLKEGNSTSSDEGSAFEED
AEDQKIGETSTGICTTSCKANGAACLPESETKSKDEAIGSDRRGRDDGHKMLSSKKEDYV
LSRRQGLKRLMDTDIAVDEESDGNSSPENRNANKFKTRNPNVHFFERCSDESEDLDLETE
KWSKNKKGDAGRGKPGHSIRRQRASARDKARSKQREEIESFTSSEDECATPATNVTRRRT
GRSEAGSFTSLRSPTHRTSEEPIDSVLGGVQEVAYMHSNQRVVGGSKAEELISRAAVRDV
FERKMYSQLPANNLLDTLESLPASFPATQPSSGPVQLQRPSVDHPVVFSNRSIHHTDCTT
VIIGDSPKAVCRQQLEDMAQHFKFVSSQQFAVQILKGNSSQRLNWLHQYYTSLSHSSVAQ
IVRENFPETLQQNSAPTVTPLSSKNDKMQQTKSSTVRKTRRYGQTRRTYPEIIQKNVSLI
QLESGNQKTDVPKPPKKQKISEKNPPECKQDFQSLVSDEQEGINCSAIEDTKTQEGSVST
RRACSAGGGPAVDQARSLGMGSGEASAAFLNHKDRDAPSSSDLQCYNAAKLSQPMKESET
FKGNSEPPSTLCNSSFLKDLIGDVSILDDLLKPKGKNGQQKNTPKTPPAFSGPANPTLIT
SSLPKLSQTTALTSKNTRKDIWDILTEGNEESINRLTDPEEVQKVCISSSLASRGFSEEQ
KSKNLWKTNNKFLWKK
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgggtgacattcaggaaagcaccctaggagaagaggagcaggaggcgaaaggcacatct
gggaaaaaacttattaactctgggtctaagcagttgatacaggagaaaccagtgttccct
ggcagcagcaccgacccaatgctttccatccctttagacctgagcaatgaagaccgggtc
ccttataccatcaacagatacttaagggattaccagagggaagggatcaggttcatctac
aacaacttcatggcctccactggttgtattctaggagatgacatgggccttgggaaaact
gtgcagatcataggttttcttgctgctctgctgcacaaaaccgggacatgggaggacata
gagaacaacaggcctcagttcctgcaaactcagttaccctccaatcaaattaatcccact
aaagtgtttctgattgtggccccattgtcagtgctttataactggaaggatgaactgaac
acgtgggggtacttccagtgtgtggtggtccatggactcaggaaagaggaggagcttgct
cgcatcaagaacggtcgcatcgagatcgccctcaccacctacgagactctgaggctctgt
ttggatcagttcaataaaattgactggtttggagtgattgttgatgaggtccacaagata
aaaaacccaaactcccagataactcaggctatgaagcagctgagatgtaagaacagaata
ggtctcactgggaccatcttgcagaacaatctggaagagctgtggtgtgtcatggattgg
gccaaaccagggtgtcttggcagcttgggacatttcaagaacagattttcagaccccatt
gaacaggcgcagaggcacagtgcaaccaaacgggccctggctacaggaagaaagacgatc
agagccctggtcaggcagatttctccttttttcctcaggagaactaaagcactcatcaga
gagcagctgccaaagaaggatgacagagtagtgtactgctctctgacagactttcagcag
accgtgtatcaggccgtgctggacactgaggatgtgacgttaatgctaagatcttcagag
aaatgcgactgccaaagtggacgcacccgaaggagctgctgctataaaacaaactctgag
ggtgtttgtgtaaagaaactctacttcacctacttggccatattgaggaaggttgccaat
catgcagcactccttcagtctacttcaagcaccagcaagaaacaggaaaggtatgtgagt
tctgtttgtgcaaaggttttccagaagtttccagactttgtgcagagatgcaaaaatgaa
gcctttgaggctctttcagacccgatgtacagtggaaagatgaaggttttgcagaagctt
cttaactactatttgccaaagaaggacaaagtgctcatcttttccctgtcgaccaggctt
ttagacatcctggagagttactgcatggcagaaggactggattttagtcgtcttgatgga
accaccaaatccagagaaagactccagattgtaaaagacttcaacagctcttctcacatc
aatctatgcctggtttctaccatggcgggtggtcttggtcttaactttgttggtgctaat
gttgttgtcctgtttgaccccacctggaaccctgccaatgatcttcaggctatcgatagg
gcgtatcgtatcggtcaatggagggatgttactgttctcaggctgatctcccttgggact
gtagaggaggttatctacctcagacaagtttacaaacagcagctgcagtgttcggtggtt
ggcaaagagagcgccaggcggtattttgaggcagttcagggaaactgtgaccataaaggg
gaactgtttggactcaaaaatctcttcaggctgcagatagaagggacatgtctcacccgc
aggatattagagcgagagggacgagtggaggctggtgtcataacaacacaaacacacaaa
caagccgagaaagagatcaaggagagcaaaaacgaggaacatgaagatttacccaaagag
ggtacaccatcagatgatgaagagcatgcagcgaacatttatgtctcaaaaatcccaaaa
ggcgtgctagatttcagcagtgggagtgaaactgatgaggagctgcaggggctaaagaga
aaggcgtcaaattcaagcgcaggccatggcagcaggagcgggaaagctgcaaatggaccc
attccgatgagtctcctacaacatggtttctccaaagttcttgaaacagtcaagaaaaga
caacagttaaaggaagggaactctacttcctctgatgaaggcagtgcctttgaggaagat
gcagaagatcaaaagataggggaaacctccacaggcatctgcacaacttcctgtaaagca
aatggtgctgcttgcctccctgaatctgaaacaaaatccaaagacgaagccattggctca
gacagaagaggcagagatgatggacacaaaatgttatcctcaaaaaaggaagactatgtt
ttaagccggagacagggcctgaaacgattgatggatacagatattgcagtggatgaggag
agtgatggaaattcctccccagaaaacagaaatgccaataagttcaaaactagaaatcca
aatgtgcacttctttgaaagatgctcagatgaatctgaggatttagacctagagacagaa
aaatggtccaaaaacaaaaaaggagatgcaggcaggggaaagccaggccacagcattcga
agacagagggcaagtgcaagggacaaggcaagatccaagcagagagaggagatagaatct
ttcacttcttcagaggacgagtgtgcgactcctgcaaccaatgtaacaaggagaagaaca
gggaggtcagaagctgggtcatttacaagtctgcgaagtccaacacatcggacatctgag
gaacccatagacagtgtattagggggcgtgcaagaggtggcgtatatgcattctaaccag
cgggttgtgggtggaagcaaagccgaggaactaatcagcagagctgcggtgcgggacgtg
tttgaacgcaaaatgtactcacaacttccagccaataacctgctagataccctggagagc
ctcccagcaagctttccagccactcagccttcctctggtcccgtccagctgcagaggccc
agtgtggatcatccagtagtcttctcaaataggagcatccaccacactgactgtactact
gtcattatcggagattctccgaaagctgtgtgcaggcagcagctggaggacatggcgcaa
cattttaaatttgtttcaagccaacagtttgctgtacagattcttaaaggaaattcatct
caaagactcaattggcttcatcagtactacacatcattgagccattccagtgtggcccag
attgtcagggaaaacttccctgaaacactgcagcagaactccgctccaactgttactccc
ttatcatcaaaaaatgacaaaatgcaacaaactaaatcttccacagtcagaaaaacaagg
agatacggtcagaccagaagaacttaccccgaaatcatacaaaagaatgtttcactaata
cagcttgaatcaggaaaccaaaaaacggatgttcccaaaccaccaaaaaagcaaaagata
tctgaaaagaatcctccagaatgtaaacaggattttcaaagtttagtgtcagatgagcag
gaagggataaactgtagcgccattgaagatacaaagacacaggaaggcagtgtttctact
cgtagagcctgcagtgctggtggtggtccagcagtggatcaggccaggagcctcggtatg
gggtctggggaggccagcgccgctttcctgaaccacaaagacagagatgctccttcttcc
tctgacctccaatgttataacgctgccaagttatcccagcctatgaaagaaagtgaaaca
ttcaaaggaaattctgagcctccttctaccttgtgcaatagctccttcctcaaagatctt
ataggagatgtatcaattcttgatgatttgctgaaacctaaaggcaagaatggacaacag
aagaacacccccaaaacccctcctgcattttcagggccggctaacccaaccctcatcaca
tcttctttacccaaattaagccaaaccactgcactgacatcaaagaacactagaaaagac
atctgggacatcctcactgagggtaacgaggagagcatcaacaggttgacagacccagag
gaagtgcagaaggtttgcatcagttccagcctcgcctcaagagggttttctgaagaacag
aaaagtaaaaatctctggaaaacaaacaacaaattcctgtggaagaagtaa

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