Cyprinodon variegatus (sheepshead minnow): 107098507
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Entry
107098507 CDS
T06110
Name
(RefSeq) short transient receptor potential channel 6-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107098507
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107098507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
107098507
NCBI-ProteinID:
XP_015251716
Ensembl:
ENSCVAG00000002692
UniProt:
A0A3Q2FEG2
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MNHKPRGGNRSSQSPGNMDRSGTRSQDNLLLNDDFREEYCSAGQNLGRHSSSDRQLTARI
STVKRRQALRGPAYMFSAPLISLSDVEQRFLEAAEYGNIPEVRRMLLQIPNLNVNAVDYM
GQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLSHPSFRDANRL
TASPAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVYTLLSKGARIDPPHDYFC
GCDSCNYQQQYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLADIEKE
FKNDYSRLSNQCKDYVVGLLDLCRSTEEVEAILNGETASDESFDLPGRPSLTRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENIPGLRQQTTAIKLLVVLAVAIGLPGLAVAYWVTPCSRV
GKVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHHQQPGSSQLKLDPPVL
HRTTTTPFTWMEILIISWVIGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSC
RFSAKKQADWAQAYVYKHNKTLDQLSREKCYFILARIDWLPSDPQLVSEGLYAIAVVLSF
SRIAYILPANESFGPLQISLGRTVKDIFKFMVIFLLVFLAFMIGMFNLYSYYLGAKQNDA
FTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMI
NSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLVTAIKSMLLYV
VHRLNKKKAEIELNQLGKSKEPGYGGSNGPTRYQKIMKRLIKRYIIKAQADRESDEITEG
ELKEIKQDISSLRYELLEEKSHNMETLDGLLRRLGDFNTM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaaaccgcggggaggaaatcgcagcagccaatctcctggcaacatggacaga
tccggaacaagaagccaggacaacctgctgctgaatgatgattttagggaggaatactgt
tctgctggacaaaaccttggcaggcacagcagctctgacaggcagctcacagctcgcatc
agcactgtaaaacggcgccaggctctacggggtcctgcctacatgttctcagctcctttg
atcagcctttcagacgtcgagcaacgtttcctagaggcagctgagtacggcaacatccca
gaggtgcgtcgcatgctgcttcagatccccaacctgaatgtcaatgctgtggattacatg
ggacaaaacgctctgcagctggctgtggccaatgaacatctggaggtgacggagctgctg
ctggggagggcagacttagccagagtgggagacgctctccttttggccatcagtaagggt
tatgttcgtatcacagaggccctgctcagtcacccttctttcagagatgctaaccgtctg
acagcaagtcctgctcaagtagacatgttggatgacttctatgcttatgatgaagatggg
acaaggttttctcatgatgtgactccagtgattcttgcagctcactgccaggaatatgag
atagtttacacgctcctgagcaaaggggcccgcatcgatcctcctcatgattacttctgt
ggctgcgactcgtgtaactatcagcagcagtacgattccttcagccactcacgctccagg
atcaatgcatacagaggactggccagtcctgcgtacctctctctctctaacgaggatccg
gtgctggcagcattggagctcagcaatgagctggccatgctagctgatatagagaaagaa
tttaagaacgattacagtcgcctgtctaaccagtgtaaagattacgtggtgggccttctg
gacctttgtcggagcacagaggaagtggaggccatcctgaacggagaaacagcttctgat
gaaagctttgatttacctggtcgcccctcactgacccggctcaaattagcaatcaaatac
gaactcaaaaagtttgttgcccatccaaactgtcagcagcagctgctgagcatttggtac
gagaacattcctgggctgagacaacaaactactgcgattaagctgctggtggttcttgct
gtggctataggactgcctggactggctgtggcgtattgggtcactccttgcagcagggtg
ggaaaagttatgcgcagcccctttatgaagtttgttgcccacgcctcatcctttacaatt
ttcctgggtctgctcatcctgaatgctgctgaccgttttgcaggaaccaccctgttgcca
aacatgacccaccatcagcaacctggaagttcacagctaaagctggaccccccagtactt
caccgcacaaccaccaccccctttacgtggatggagatcctaatcatttcatgggtcatt
ggcatgatttgggctgaagtgaaggaaatctggagccagggacccggagagtacctggtt
gaaccatggaacttcttggactttgggatgttggccatttttctggcgtccttcagctgc
cgtttctctgctaagaagcaagctgactgggcccaggcctatgtgtacaaacataacaaa
acactggaccaactgagccgagagaaatgctacttcattctggcacgtatcgactggctg
ccctcagatcctcagctggtgtcagagggcctctatgccatcgctgtggtgctgagcttc
tctcggattgcttacatcctgccagccaacgagagctttggtccactccagatctctttg
ggaaggactgtcaaagacatcttcaagttcatggtcatcttcctgctagtcttcttggcg
ttcatgatcggcatgttcaacctgtactcttactacctgggagcgaagcagaatgacgcc
ttcactaccctggaggagagcttcaagactttgttctgggctatatttggactatcagag
gtcaagtctgtagtgattaacaatggacacaaattcatagagaacattggttacgttctg
tacggggtttacaacgttaccatggtgatagtgctgctcaacatgctcatcgctatgatt
aacagctccttccaggagattgaggacgatgctgatgttgaatggaagtttgctcgggca
aaactttggttttcgtacttcgaggagggaaggacactccctgttcccttcaatctggtc
cccagtcccaaatctatgctgggattggtcacagccataaagtccatgctcttatatgtg
gttcacagactcaataagaagaaagctgagatagagcttaatcaactgggaaagagcaaa
gaaccaggatatgggggatctaatggtccaacaagatatcagaagatcatgaagcgtcta
atcaagcgttatataattaaagctcaagcagacagagaaagcgacgagatcacagaaggt
gagctgaaggagattaaacaggatatttcaagtctgcgatatgagctgctggaggagaaa
tcccataacatggagacactggatggtcttttgaggaggctgggagattttaatacaatg
tga
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