Cyprinodon variegatus (sheepshead minnow): 107098596
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Entry
107098596 CDS
T06110
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107098596 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107098596 (nthl1)
Enzymes [BR:
cvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
107098596 (nthl1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107098596 (nthl1)
Prokaryotic type
107098596 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
107098596
NCBI-ProteinID:
XP_015251844
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSSPYFMQRSSVLTRSSSTGRVAAASLSSKLTSTQRDVDTSSAVKVKVEAEEATVSKLES
STGEQQTEASSQPPHSRRRRQVKVEYDRDDGISQVKVEHWEPLDWMKQLGFIREMRSGRD
APVDNMGAEKCYDAEAPPQVRRFQVLVSLMLSSQTKDQVTGAAMQRLRAHGCTAENIVAT
DDKKLGELIYPVGFWRNKVKFLKQTSAMLMTEFGGDIPNSVEGLVRLPGVGPKMAHLAMD
IAWNQVSGIGVDTHVHRISNRLGWLKKPTKNPEDTRKALEDWLPRELWSEINWLLVGFGQ
QVQRTNIKLKLNLNRKAIPQRQIKSQVFPPSDKEGRLKNIER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgtattttatgcaacgcagctctgtcctcacccggagtagcagtactgga
agagtagctgcggcctctttaagttccaaactcaccagcacacagagagatgtggacacc
agttctgcagtgaaggtgaaggtggaggcggaggaggcgacagtgtccaaactcgagtca
tccaccggtgaacagcagacagaagcttcgtcacagcctccacacagtcgcaggagaagg
caggttaaggtggaatatgacagagatgatggtatttcccaggtaaaggtggagcactgg
gagcctctggattggatgaaacagttgggtttcatccgggagatgaggagcggtcgcgat
gctcctgtggataacatgggagcagagaaatgctatgacgcagaagcccctccacaggtg
agacgcttccaggtgttggtgtcgctcatgctgtccagccagacaaaggaccaggtaacg
ggagcagctatgcagaggctccgagcacatggctgcactgcagagaacatcgtcgccact
gatgataaaaaactgggagaactcatctatcctgtgggcttctggaggaataaggtgaaa
tttctgaagcagacgtcagccatgctgatgactgagtttgggggagatatcccaaacagc
gtggaagggctggttcgtctgccgggggtcggacctaagatggctcacctggccatggac
attgcctggaaccaagtgtctggaataggagtggacacacatgttcatcgcatctccaac
aggctgggctggctcaagaaaccaaccaagaacccagaggacacacgcaaggccctggag
gactggttacctagggagctgtggagtgagatcaactggttgctcgttggtttcggacag
caggtccaacgaacaaatataaagttaaaactgaacctgaacaggaaagcaataccacag
aggcagatcaagagtcaagtgttccctccatcagacaaagaaggcaggttaaaaaacatt
gagcgctga
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