Cyprinodon variegatus (sheepshead minnow): 107098762
Help
Entry
107098762 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
cvg04144
Endocytosis
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107098762
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107098762
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107098762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107098762
04121 Ubiquitin system [BR:
cvg04121
]
107098762
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107098762
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107098762
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107098762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
SOG2
Motif
Other DBs
NCBI-GeneID:
107098762
NCBI-ProteinID:
XP_015252085
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MASGVSKSSTSNGYPIKAQLQVTVLSAKLRENKKNWFGPSPYVEVTVDGQSKKTEKCNNT
HTPKWKQPFTVVATPFSKLVFRVWSHQTLKSDLFLGQAKLDLSETLKANDMKISELIQTL
QLYSDREQTDVVGDLSVLLDGMTVDPEVFASAEADHCSTSNGESSQQNGDHTLRPSRDSS
PALDSVEHRSSPSTQRTVNSKGSPSLSGKPVRPPRPSRPPPPTPRRPTVSPASSSNGSAP
TEASEGHSAPDTPVRTSGPTSAPDYSPSTSSNRSSTSGAAATRPPTSNTTPSLPPRVPSV
NHGPLPPGWEQRVDQNGRVYYVDHVLKRTSWERPEPLPPGWERRLDQMGRPYYVDHMTRT
TTWQRPTMETVRNYEQWQHQQNHLQGAMQQFNQRFIYGAQDQASAAQNKEFDPLGPLPHG
WEKRTDSNNRVYFVHHPTRSTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVDHNRRT
TTYIDPRSGKSSLENGPQIQYVRDFKAKVQYFKFWCQQLALPQHVKITVTRKNLFDDSFQ
QIMSINPQDLRRRLWIIFPGEEGLDYGGVSRDNNIEDCGLEMFFSVDKEILGEISTHELK
PGGGDIPVTEENKEEYIKLVAEWRLFRGVEDQMQAFFEGFNEILPQQYLQYFDAKELEVM
LCGMQEIDLGDWQRNTIYRHYTKTSKQIVWFWQFMKELDNEKRMRLLQFVTGTCRLPGGG
FADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFG
QE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccagtggagtcagcaagtccagcacctccaatgggtaccccataaaggcacagcta
caggtcactgtgctatcagcgaaactgagagaaaacaagaagaactggtttggccccagt
ccttatgtggaagtgacagtcgacggccagtccaagaaaacagaaaaatgcaacaacact
cacacccccaaatggaagcagccattcactgtggttgccactcccttcagcaagctagtg
tttcgtgtttggagccaccagaccttgaagtcagacttgtttttaggccaggccaagctg
gacctcagtgaaacactaaaggccaacgacatgaaaatttctgagttgatacagactctc
cagctgtacagtgacagagagcaaacagatgtggtgggagacctgtctgtccttctggac
ggcatgacggtggaccctgaagtgttcgcctcagcagaggcagaccattgcagtacatct
aatggagaatcatcacagcagaatggggatcacactttgaggccaagtcgagacagctct
ccagctttggacagtgtggagcacagatcctctccaagcactcaaaggacagttaacagc
aaaggttccccatcgttgagcgggaagccagttcgaccacctagaccgtctaggcctcct
cccccaactccccgcaggccaactgtttcaccagcatcttctagcaacggctccgctccc
acagaggctagtgagggccattcggcccctgatacaccagtgcggacctcaggacccaca
tctgctccagactacagtccatcaacgtcctctaacaggagctccacatcaggagctgca
gcaaccaggcctccaaccagcaacaccacaccttccctccctcccagagtaccctccgtc
aaccatggaccattacctcctggatgggagcagagggtggaccagaatggtcgggtgtat
tatgtggatcatgtgctaaagagaacatcatgggaacgtccggaaccacttcctccagga
tgggagcgtcgtttggaccagatgggccgtccctactatgtcgatcacatgacacgaacc
accacatggcagcgccccacaatggagactgtccgtaactatgaacagtggcagcaccag
caaaaccatctgcagggcgccatgcagcagttcaaccagaggtttatatacggggcccaa
gatcaggcatcagctgctcagaataaggagttcgatcctcttggcccgctgcctcatgga
tgggaaaagaggactgactcaaacaatagagtttactttgtacatcacccaacacgctca
acacagtgggaggacccacggacacagggattactgaatgagaagccgctcccagaaggc
tgggagatgaggttcactgtggacggtattccttattttgtagaccacaacaggagaacc
accacctacatcgaccctcgctcaggaaaatcctcacttgaaaatggaccacagatccaa
tatgtccgagacttcaaggctaaagttcagtactttaaattttggtgccagcaattggcg
ttacctcagcacgtcaagatcacagtaacaaggaagaacctgtttgatgactctttccag
cagatcatgagcatcaatcctcaggatctgaggagaaggctgtggatcatctttccagga
gaagaaggtcttgattatggaggagtttccagggataacaacatcgaggactgtggttta
gagatgttcttctcagttgataaggagatccttggagaaatctccacccatgagcttaaa
ccgggcggaggagacatccccgtcaccgaggaaaacaaggaggaatacatcaagttggta
gcagagtggcggctgtttagaggagtagaagaccagatgcaggcgttctttgaaggcttt
aatgagatccttcctcagcagtacctgcagtattttgatgctaaagagttagaggtgatg
ctgtgtggaatgcaagagattgatcttggagactggcagagaaacaccatctacagacac
tacactaagaccagtaaacagatagtctggttctggcagttcatgaaggagcttgacaat
gagaagcggatgaggctgctgcagtttgtcaccggcacttgtcgtctgcctggaggaggc
ttcgctgaccttatgggaagcaacggtcctcagaagttctgcattgagaaggtgggaaag
gaaaactggcttcccaggagtcacacatgctttaacagattggacttaccgccctacaag
agctacgaacaactgaaagagaagttaatgttcgccatcgaggagacagaaggatttgga
caggagtga
DBGET
integrated database retrieval system
