Cyprinodon variegatus (sheepshead minnow): 107098764
Help
Entry
107098764 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
cvg04144
Endocytosis
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107098764
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107098764
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107098764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107098764
04121 Ubiquitin system [BR:
cvg04121
]
107098764
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107098764
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107098764
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107098764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
107098764
NCBI-ProteinID:
XP_015252089
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MANGVIMSSPSNRYPLKAQLQINVLSAKLRENKKNWLGPSPYVEVTVDGQSKKTEKCNNT
HTPKWKQSLTVIVTPFSKLMFRVWSYQTLKSDLFLGQAKLHISETLKANNMKISKVVQTL
QLYADREQTDWVGDLCVVLDGMTVDPEMFAKAEADGQSTYNGGASHFNGDPTLRPNRDSF
PTVASVEHRVSPSPQRTANSRGSPSLGGKPFRPPRPSRPPPPTPRRPTSSPASSGNGSAP
TEASEGPASAPDSSPSTSSTPGAAETSNTTPSLPPRVPSNNGPLPPGWERRVDQNGRVYY
VDHIGKKTTWEPPESLPPGWECRLDEIGRPYYVDHTTRTTTWQRPTMESVHNYEQWQHRQ
NHLQGAMQQFNQRFMYEDQQKMSAPQNKGFDPLGPLPPGWEKRTDSNNRVYFLHHPTRST
QWEDPRTQGLLNEKPLPEGWEMRFTVDGVPYFVDHNRRTTTYIDPRTGKSSLENGRQITY
VRDFQAKVRYFRFWCLQLALPQHIKIIVSRQNLFEDSFQQIMSINPQDLRRRLMVIFPGE
EGLDYTGLSREWFFLLSHEVLNPMYCLFEYAGNDNYCLQINPASSINPDHLKYFRFIGRL
VAMALFHGKFIDTGFSLPFYKRMLNKPLTVNDLESIDPEFYNSLMWIKDNNIEDCGLEMF
FSVDKEFLGEISTHELKPGGGDIPVTEENKEEYIKLVAEWRLFGGVEDQMEAFFEGFNEI
IPQQYLQYFDAKELELMLCGMQEIDLGDWQRNTIYKHYTKTSKQIVWFWQLMNEIDNEKR
LRLLQFVTGTCRLPSGGFAELMGSNGPQKFCIEKVGKESWLPRSHTCFNRLDLPPYKSYE
KLKEKLLYAIEETEGFGQE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccaatggagtcattatgtcaagcccctccaatagatatcccctgaaggcacagcta
cagatcaatgtgctatctgcgaaattaagagaaaacaagaagaactggcttggccccagt
ccttatgtggaagtgacagtcgatggccagtccaagaaaacggagaaatgcaacaacact
cacacccccaaatggaagcagtcactcactgtgatcgtcactcccttcagcaaactaatg
tttcgtgtttggagctaccagacgttgaagtcagacttgtttttaggccaggctaagctg
cacatcagtgaaacactaaaggccaacaacatgaaaatttctaaggtggtacagaccctc
cagttgtacgctgacagagagcaaacagattgggtgggagacctgtgtgtcgttctggat
ggcatgacagtggaccctgaaatgttcgccaaagcagaggcagacggtcaaagtacatat
aatggaggagcatctcactttaatggggatcccacattgaggccaaatcgagacagcttt
ccaactgttgccagtgtggagcacagagtctctcccagccctcagaggacagcaaacagc
agaggttctccatcattgggcgggaagccgtttcgaccaccgagaccatccaggcctcct
cccccaactcctcgcagaccaacttcttcaccagcatcttctggaaatggctccgctcct
acagaggctagtgagggccctgcatctgctccagactccagtccttcaacatcctccaca
ccgggagctgcagaaaccagcaacaccacaccttccctccctcccagagtaccctccaac
aatggaccattaccccctggatgggagcggagggtggatcagaatggcagggtgtattat
gtggatcacattggaaagaaaacaacatgggaaccacccgaatcacttcctccaggatgg
gagtgtcgattggacgaaataggccgtccctactatgtagatcacaccacacgaaccacc
acatggcagcgccccacaatggagtcagtacataactatgaacagtggcagcaccggcaa
aaccatctgcagggcgccatgcagcagttcaaccagaggtttatgtatgaggatcaacag
aaaatgtcagctcctcagaacaagggatttgatcctctcggcccgctgcctcctggatgg
gaaaagaggactgactcaaacaatagagtttactttttacatcacccaacacgctcaaca
cagtgggaggacccacgaacacagggattactgaacgagaagccgctcccagaaggctgg
gagatgaggttcactgtagacggcgttccttattttgtagaccacaacaggagaaccacc
acctacatcgaccctcgcacaggaaaatcctcacttgaaaatggaagacagatcacatat
gttcgagacttccaggccaaagttcggtacttcagattttggtgcctgcaactggcctta
cctcagcacatcaagatcatagtttcaaggcagaacctctttgaagactcttttcagcag
ataatgagcatcaatccccaggatctgagaagaaggttgatggtcatttttccgggagag
gaaggtcttgattatacaggtctttccagggagtggttcttcctgttgtcccacgaggtt
ttgaaccccatgtactgcctgtttgaatatgctggcaatgataactactgtcttcagatc
aaccctgcttcctccatcaaccctgaccacctcaagtacttcaggttcattggacggctt
gttgcaatggctcttttccacggcaagtttatcgacactggtttctcgctgccattttac
aaacgcatgctcaacaaacctttgactgtcaacgatctggagtccattgatcctgagttt
tacaactccctcatgtggatcaaggataacaacatcgaggactgtggtttagagatgttc
ttctcagttgataaggagttccttggagaaatctccacccatgagcttaaaccgggtgga
ggagacatccccgtcaccgaggaaaacaaggaggaatacatcaagttggtagcagagtgg
cggctgtttggtggagtagaagatcagatggaagcgttctttgaaggctttaatgagatt
atccctcagcagtacctgcagtattttgatgctaaagagttagagctgatgctgtgtgga
atgcaggagattgatcttggagactggcagagaaacaccatctacaaacactacactaag
actagtaaacagatagtctggttctggcagctgatgaacgagattgacaatgaaaagagg
ttaaggctgctgcagtttgtcaccggcacttgtcgtctgcctagtggaggcttcgctgag
cttatgggaagcaatggtcctcagaaattctgcattgagaaggtgggaaaggaatcctgg
cttcccagaagtcacacatgctttaacagactggacttgccgccctataagagctacgaa
aaactgaaagagaagttgctctacgccatagaggagacggaaggatttggacaggagtaa
DBGET
integrated database retrieval system
