Cyprinodon variegatus (sheepshead minnow): 107098785
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Entry
107098785 CDS
T06110
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00260
Glycine, serine and threonine metabolism
cvg00270
Cysteine and methionine metabolism
cvg00670
One carbon pool by folate
cvg01100
Metabolic pathways
cvg01230
Biosynthesis of amino acids
Module
cvg_M00035
Methionine degradation
cvg_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107098785
00270 Cysteine and methionine metabolism
107098785
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
107098785
Enzymes [BR:
cvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
107098785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
107098785
NCBI-ProteinID:
XP_015252118
Ensembl:
ENSCVAG00000000393
UniProt:
A0A3Q2D3F5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MPSLPSPKEASVKVCPHSTKLHAHTNGGGGKLRDGSCPVNGSAPEDLDDSSRTIQIKTKN
PAVDRKWIRPDLPSRCTWSLEASKADSPHAHVSKAASPTILPNILHRIGDTPMVRLNKIP
KAFGIKGEILAKCEFFNAGGSVKDRISLRMIEDAEKAGDLKPGDTIIEPTSGNTGIGLAL
AAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAWRLKNEIPD
SHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKERCPNIK
IIGVDPEGSILAEPEEINKTDKGPYEVEGIGYDFIPTVLDRSVVDTWYKSNDEESFNMAR
MLIRDEGLLCGGSSGTAMAAAVKFAKELKEGQRCVVILPDSIRNYMSKFLSDKWMVHKGF
LREEDIMVKKPWWWNLKVQSLNLSAPLTVLPTVTCQQSIKILKEMSFDQAPVVDEAGVIL
GMVTLGNMLSSILAGKIKLSDPVSKVLYKQFKQIRLNDNLGNLSHILETDHFALVVHEQI
QYLTNGSTELKQMVFGVVTAVDLLNFVTGREKRERSVSESTDEL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctctcccttcgcccaaagaggcctccgtcaaagtgtgccctcactccaccaag
ctgcacgcccacaccaacggaggcggcggcaagctccgcgacggctcctgtccggtcaac
gggagcgcgccggaggacctcgacgactccagcaggaccattcagattaaaacgaaaaac
ccggctgtggacaggaagtggatccggccagacctcccaagccgctgcacgtggagtctg
gaggcctctaaggccgactccccccacgcacacgtttcaaaggccgcctctcctacaatc
cttcccaacatcctacacaggattggcgacactcctatggtgcgactcaacaagatcccc
aaagcctttggcatcaaaggcgaaatactggccaagtgtgagttcttcaacgccggaggc
agtgtgaaggacaggatcagtctgcggatgatagaagatgcagagaaagctggagacctc
aagcctggggatacgataatagagcccacctcaggaaacacgggtattggattggctctg
gctgctgctgttaaagggtaccgttgcatcatcgtcatgcctgagaaaatgagcatggag
aaggtggatgtcctcagagctcttggagccgaaatcgtccgaactcccaccagcgctcgt
ttcgattctcctgagtctcacgtaggcgtggcctggcgcctgaagaacgagatcccagac
tctcacatcctggaccagtaccgcaacccgagcaatcccctggcccactacgacaccacg
gccgaggagatcctggagcagtgcgatggtaaagtggacatgctggtggcaggagcagga
acaggaggaacgattacaggcatcgctcgtaaactaaaggagagatgcccaaacatcaaa
attatcggcgtcgacccagaaggatccatcctggccgagcctgaggaaatcaataagact
gataagggcccgtacgaggtggaggggatcgggtacgacttcatccccaccgtgcttgac
agatctgtggttgatacctggtacaagtctaacgacgaggagtccttcaacatggctcgg
atgctcatcagagatgagggcctgctctgcggaggcagctctgggaccgccatggctgct
gctgtgaagtttgccaaagagctgaaggagggccagcgctgcgtggtcatcctgccggac
tccatccgcaactacatgtcaaagttcttgagcgacaaatggatggtccacaaaggcttc
cttagagaggaggacatcatggtgaagaagccctggtggtggaatctgaaggtgcagagc
ttgaacctgtcggcccctctcaccgtcctgcccaccgtcacctgccagcagagcatcaag
atcctgaaggagatgagcttcgaccaggcgcctgtagtggacgaagcaggggtaatcctt
gggatggtgacactaggaaacatgctgtcatcaattctggcagggaagatcaagctgtct
gatcccgtcagcaaagtgctctacaaacagttcaaacagattcgcctgaatgataatttg
gggaacttgtctcacatcctggaaacggatcattttgccttggtggtgcatgaacagatc
caatacctgacgaatggctcgaccgaattgaagcagatggttttcggcgtggtgacggcc
gtcgacctgctcaacttcgtcaccggccgggaaaagcgagaacgctccgtgtcggagtcc
actgacgagctgtga
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