Cyprinodon variegatus (sheepshead minnow): 107099428
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Entry
107099428 CDS
T06110
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107099428 (exd2)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
107099428 (exd2)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107099428 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
At5g52880_ARM
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
107099428
NCBI-ProteinID:
XP_015253009
Ensembl:
ENSCVAG00000016150
UniProt:
A0A3Q2E9F8
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MQVRRNGATQQTSLHPCERGVLSAANIKSVNMSHRGPFTTVITVLSAALGGLLIWQVYRT
KRKKLSSIQKAAVQLAPLCPVEDATESQQIQAQGVAEEEFKTTECQTTKVPPPVCIPSCE
QLLAVKPVMVSSREEWQEMWPLMQTELSVFPVLGLDCEWVKTEGVSIKGRASVVSLLQMA
TYSGLCVLVRLLPFRGAQQPFPTSFMEVLRDPCILKVGVGCYDDGKRLTRDYGLSLTSTV
DLRYMALRQRRSSVSNGLSLKSLAADLLNVSLDKSLEVRCSDWEADQLTLEQMTYAARDA
QISIALFLHLLGLQDEASPAFSSGSSYSELVSRCQGLVDVPFRGRGDGEDRTHEGERRRR
MRKPAACESPESGDQQVPDPRKNNKRKPLGVGYSARKSPLYDNCFLYAPDGQPLCTCDKK
KAKWYLDKEIGVLQSEDPFIVRLLFEPSGRPDSQQDYYLTAKENLCVVCGKADSYIRKNI
VPHEYRRHFPTEMKDHNSHDILLLCTSCHAASNVHDGFLKQQLADEFAAPQGCEEGVRLL
EDSDRRRVRSAARALLSARDGLPEQRREELQVLIKNYMNMNGEQELTAEALQEAASLETR
ILNEAYIPHGLKVVRAHAERGLQGLMELERRWRQHFLTTMQPRHLPPLWSVDHNHSKFLR
KYGEDLPIKLN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcagaagaaatggagcaacgcagcaaacaagtcttcatccatgtgaaaggggc
gtcctgtcggctgcaaacataaagtctgtcaacatgtctcatcgggggcctttcaccacc
gtcataacggtactgagtgcagctttaggtgggctgctcatatggcaggtgtatcgcaca
aaacggaagaagctgtcttccatccagaaggcggcggttcagttggctcctctttgtcct
gttgaagatgctactgagagtcaacaaatccaggcgcaaggcgtggctgaggaggagttt
aaaaccacagagtgtcaaaccacaaaggtcccgcctcctgtctgtatcccatcctgtgag
cagctgctggcggtgaagccggtgatggtgagctccagagaggaatggcaggagatgtgg
ccactgatgcagacagaactatcagtcttccccgtgctggggctggactgtgaatgggta
aagaccgaaggcgtgtcgattaagggcagagcctccgtcgtctctctgctgcagatggcc
acctactctggcctgtgtgtcctggtcaggctgctgccgttccgaggcgcccagcagccg
ttcccaactagcttcatggaagtcctcagagacccgtgcattttgaaagttggggtgggt
tgctatgacgatgggaagcgtctgacccgtgactatggcctatctctgacctccacggtc
gatctgcgctacatggctttaaggcaaaggcgatcttctgtcagtaacggcctcagtctg
aagtccttggctgcagatctgttaaacgtgtctctggataaatctttggaggtgcgctgc
agcgactgggaagcggatcagttaacactagagcagatgacttacgctgccagagatgcc
cagatctctatcgccctcttcctccacctccttggcctccaggatgaagccagtcccgcc
ttttccagtgggagctcctactctgagttggtctcccgctgccagggcctggtggacgtc
cccttcaggggccgtggagacggagaggacaggacgcatgaaggagagaggcggcggaga
atgaggaagccggcagcgtgcgaaagcccagagtctggagatcagcaagtcccagaccct
cgaaagaataacaagaggaaaccgctgggcgtgggatactctgccaggaagtctcctctc
tatgataactgcttcctgtacgcccccgatggccaacctctctgtacatgtgacaaaaag
aaagccaagtggtacctggacaaagaaatcggagtgctgcagagtgaagatcccttcatt
gtgaggctgctctttgagccatctggacgccctgactcccaacaggactactacctgacc
gccaaggaaaacctctgcgtcgtctgtggaaaagcggattcctacatcaggaaaaacatt
gtcccacatgagtacagacgacatttccccacagagatgaaagaccacaactcccacgac
atcctgctgctctgcaccagctgccacgctgcttctaatgtccatgacggcttcctgaag
cagcagctggctgatgaatttgccgcccctcaaggatgcgaggagggagtccggctgctg
gaggactcagaccgccggcgggtgcgttccgccgctcgggcgctgctcagcgccagggac
ggcctgccggagcagcggcgggaggagctgcaggtgctgatcaagaactacatgaacatg
aacggcgagcaggagctgacagccgaggcgctgcaggaggctgccagcctggaaaccagg
atcctaaatgaggcgtacatacctcacggccttaaggtggtgcgagctcacgccgaacga
ggcctgcagggcctgatggagctggagcgtcgctggaggcagcactttctcaccaccatg
cagcctcgccacctccctcccctgtggtcggtggaccacaatcacagcaagttcctccgc
aagtacggagaggacctgcccatcaaactcaactga
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