Cyprinodon variegatus (sheepshead minnow): 107099467
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Entry
107099467 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 1-like
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107099467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107099467
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
107099467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_2
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107099467
NCBI-ProteinID:
XP_015253092
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MVWVRWGLLLSFGLFLSPVCNSAERQQSRSGFRRLYVLQPAPGPGPGQRPGSAAGEGAVR
LSSISTRHGPFGDNLAYNVEVTGKFGGQVRNRRMGNPAAAAPQQQDQNQNQLMKLSGVNV
CGGQCCHGWSKTQGSQRCTKPNCFPSCQNGGMCLRPQLCVCKPGSKGKACEQTTVAVPSN
PVIPGRETNGGHTNGNNVVPQRPIPQQVPIPQQAPPNGYTSSNNLAHMKLTVKAAPQFVR
PHYIQQHIQQQIHPAPIHPGQSQQYVIKPKYYHTHTTHTQMRVHPQPERPIPLTVGHNSL
HALGNQTGRIKVVFTPTICKVTCIGSRCHNNCEKGNTTTIISENGHTTDTLTAPNFRVVV
CHLPCINGGKCSARDKCQCPPNFVGKFCQMPVYGGSQHHHQQHHHQQHHQQSSAAYSQSQ
ILSTHSLPLTYSHGQNPVFSSGTVNIHIKHPPEASVQIHQVSKLDNYSINGQHGSSYNYH
HSESSQKIQQHGHPNQQGQKVLQYHQPATSKNTLGRCFQETTAAIPLINCPPGYKRINSS
HCQDMDECQLQSVCSNGECLNTLGSYMCTCKPGYSPDSTLTSCIPNTPTIQEEKGSCFRL
VSSARQCLHPVSAQLSKQLCCCSVGKAWGPHCDKCPHPGSAKFKEICPGGMGYTILPNPP
VNKPVTVITEPQDWSSFQPLPTPEKPVEAFGTTEEILPEVVEKTSPPAPVKILPSNAGQD
IAPTQFAEVDECQINPDICGQGVCYNTVEGYTCHCDVGYHLDDSQATCVDIDECENKTVC
PSGICYNEPGGHSCGSCPDGFVGHEGHCIGRSDPVHKVCPMXCYPVLSCHVCILLTMWXD
NLCTTSDIDECQDERVCIRGQCLNTEGSFLCRCSPGFRLSSTGDECDDVDECQEEASPCQ
DVGECVNNVGSYTCICPEGYKQISSTNCTDVDECAEELCSPHGTCLNTEGSYLCVCDSGF
AASLHSPSCDDIDECGLNETRCGPHGDCENRLGSFYCHCDQGYQVAQDGQTCEDVNECEL
LSGACGEAECMNMDGSFLCVCPKGQEYNVVIAKCEPIQTGPLVERKDCYYHLNDENLCES
VLSSHVTLQECCCTLGAGWGDNCEVYPCPVNGTDQFNQMCPSGRGFIPNEDLLYGITLPN
SYKDVDECKLFDKEVCKGGYCGNTEGSYECYCTSGHYYDPIKLECTDVNECLDESICGGE
ECLNTEGSYICLCKPPMVLDQISNLCVEDLQLPEQPTMEMQNYEEICWQKVTETKVCMDP
LNPYKKTTFTECCCRYGEGWGLDCALCPDRNSDDYASMCNIPLGGRRQPYGQDALVAGSV
HEYEVDPDYLTTSDEKNVQNFYENEEYRYSAFEGLQAEECGILNGCENGRCVRVQEGYTC
ECFEGYTLDLSRMVCVDVNECLELNTRMLLCKNGKCINTAGSYQCECLPGYRASDKPNFC
VKSDTHQTSTHTQ
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggtcagatggggcctcctgctctccttcggcttgtttctctcgcctgtctgt
aactcggcggagcgacagcagagtcggagcggcttcaggaggctgtatgtgctgcagccc
gctcccgggccgggaccgggacagcggcccggttcggctgctggggaaggcgcagtgcgc
ctcagctccatctctacgcgccacggcccgtttggagacaacttggcatacaacgttgaa
gtcacaggaaagttcggcggccaggttcgcaaccgcaggatggggaacccagcggctgca
gcccctcagcagcaggaccagaaccagaaccagctcatgaagctgtccggtgtaaatgtc
tgtggaggacagtgctgccatggatggagtaagactcagggatcgcagagatgcacaaag
ccaaactgcttcccttcctgccagaatgggggaatgtgcctgaggcctcagctctgcgtc
tgcaaaccaggctcaaaggggaaggcatgtgaacagaccacggtggcggtgccctccaat
ccggtgattcctgggagagaaaccaacggcggccacactaatggaaacaacgtggtaccg
cagaggcccatacctcagcaggtgcccatacctcagcaggcgccccctaatggttacacc
tcttccaataacttggcccacatgaagctaacggtcaaggcagccccccagtttgtgaga
ccccattatatccagcaacatatccagcagcaaatccatcctgcgccaatacaccctgga
cagagccagcagtacgtcatcaagcctaaatactaccacacacacaccacacacacacag
atgcgtgttcatccccaacctgagcggccaatccctctgacagtgggacacaactccctc
catgcactggggaaccagacaggaaggatcaaggtggtcttcacacccaccatctgcaag
gtgacctgcataggaagcagatgtcacaacaactgtgagaagggaaacaccaccaccatc
atcagtgagaacggccacaccacagacacgctgacagctccaaacttcagagtagtggtg
tgtcacctaccgtgcatcaatgggggtaaatgcagtgccagggacaagtgccagtgtcct
ccaaactttgtgggaaagttttgccaaatgccagtttatggtggatcccagcatcatcat
cagcagcatcatcatcagcagcatcatcagcagtcctcagcagcctacagccagtctcag
atcctctctactcatagcctgccgctaacatacagtcatggacagaaccctgtgttcagc
tcaggaacggtcaacattcacatcaaacaccctccagaagcctcggttcagattcaccag
gtatccaagctggacaactactccatcaacgggcagcacgggtccagctacaactatcac
cactctgaaagcagccagaagatccagcagcatggccaccctaaccagcagggccaaaag
gttctccagtaccaccagcctgccacctccaagaacacactgggccgctgcttccaggag
accacagctgccatccctctgatcaactgtcctccaggatataagaggatcaacagttcg
cattgccaagatatggatgaatgccagctgcagagtgtttgctctaatggagagtgtctg
aatactctgggtagttacatgtgcacatgtaaacctggctacagccccgactccactctc
acctcctgcatacccaacacacccaccatccaggaagaaaagggttcttgcttccgcttg
gtcagctcggcaaggcaatgtttacacccggtatctgcccagctgagcaaacagctttgc
tgctgcagtgtgggcaaagcctggggccctcactgtgacaaatgcccccatcctggatca
gctaagtttaaagaaatctgccctggtggaatgggctacaccattttaccaaaccctcct
gtaaacaaaccagtgactgtgattacggagccacaggattggtcatcctttcaacccctc
ccaacaccagagaaaccagtggaggcttttgggacaacagaggagattctaccagaagtt
gttgaaaagacgtctcctcctgcaccagtgaagatcctcccatccaacgcagggcaggac
atcgcacccacgcaatttgcagaggtggatgaatgccagatcaaccctgacatatgtgga
caaggggtttgttacaacacagtggagggctacacctgccactgtgacgtaggataccac
ctggatgacagccaggccacctgtgtggatattgatgagtgtgaaaacaagacggtttgt
ccttcagggatttgctacaatgagccaggaggccatagctgtggctcctgtcctgatggc
tttgtcggccatgaaggtcactgcattggtaggtctgaccctgttcataaagtctgtcca
atgnattgttatcctgtgctttcctgtcatgtttgcatcttactgacaatgtggtaagat
aacctttgtaccacttcagatatagacgagtgccaagatgagcgagtgtgtatcagaggc
cagtgcctgaacaccgaaggctccttcctgtgccgctgctcgccaggcttccggttgtcc
tcaactggagacgagtgtgatgatgtggatgagtgtcaggaggaagcctctccttgtcag
gatgtgggagagtgtgtgaacaatgtcggctcctacacctgcatctgccctgagggttac
aaacagatcagcagcaccaattgcacagatgtggatgaatgtgcggaagaactttgctcc
cctcatggaacgtgtctgaacactgaaggctcctatctgtgtgtgtgtgacagtggattc
gctgccagccttcattcgccttcttgtgatgacattgatgagtgcgggcttaacgaaaca
cggtgtggaccccacggtgactgtgagaacagactgggctctttctattgtcattgtgac
caaggctaccaggtggctcaggatggccagacctgtgaagatgtgaacgagtgcgagctt
ctgagtggtgcgtgtggagaggcagagtgcatgaacatggacgggtccttcctctgtgtg
tgtcccaaaggacaggagtacaacgttgtgattgccaagtgtgagcccatccagacaggc
cctttggtggagcggaaggattgctactaccatcttaatgatgagaacctgtgcgagagt
gtgctgagcagccatgtcacgctacaggagtgctgctgcactctgggagcagggtggggg
gataactgtgaggtatacccttgtcctgttaacggtacagaccagttcaaccagatgtgt
ccttctggaagaggttttattcccaatgaagatttgttatatggaataaccctccctaac
agttacaaagatgtagatgaatgcaaactgtttgataaggaggtgtgtaaaggtggctac
tgtgggaatacagaaggaagctatgagtgctactgtaccagcggacactactacgatcca
atcaagctggaatgtacagatgtcaatgagtgtttggatgagtccatttgtggaggggaa
gaatgtttgaacacggaaggttcatacatttgcttatgtaaacccccaatggtgctggat
caaatctctaatctctgtgtcgaagatctccagctgcctgagcaaccaacgatggagatg
cagaattatgaggagatctgctggcaaaaagtaacagaaaccaaggtgtgcatggatcct
ctgaacccctacaaaaagacaaccttcactgagtgctgctgtcggtacggagagggctgg
ggattggactgtgccttatgtccggaccgaaactcagatgactatgcgtccatgtgtaat
attcctttgggtgggaggcggcagccatacggtcaggacgccctcgttgccggttcagtc
catgagtacgaagtggacccagactacttgactacaagtgatgagaagaatgtccaaaac
ttttatgaaaatgaagagtatcgttacagtgcatttgagggcttgcaagcagaggaatgc
gggattcttaacggatgtgagaatggccggtgtgtccgggttcaggagggttacacctgc
gaatgctttgaaggatacacactcgacctgtcccgtatggtctgcgtcgatgtgaacgag
tgcttagagctgaacacccggatgttgttgtgtaaaaacggaaaatgcatcaacactgcg
ggctcctatcagtgcgagtgtctcccaggctacagggcttctgacaaacccaacttctgc
gtgaagtcagacacacatcaaacatccacacacactcagtga
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integrated database retrieval system
