Cyprinodon variegatus (sheepshead minnow): 107101602
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Entry
107101602 CDS
T06110
Symbol
iars
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107101602 (iars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvg01007
]
107101602 (iars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107101602 (iars)
Enzymes [BR:
cvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
107101602 (iars)
Amino acid related enzymes [BR:
cvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107101602 (iars)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107101602 (iars)
Prokaryotic type
Other AARSs
107101602 (iars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
PriX
Motif
Other DBs
NCBI-GeneID:
107101602
NCBI-ProteinID:
XP_015256074
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MMEARLGALFKSESEYTILDKFPGKVLKGKKYKPLFHYFIKFAEKGAFQVLTDNYVKEEE
GTGVVHQAPYFGADDYRVCAEYNIIQRDQAPICPVDASGCFTSEVTDFAGQYVKDADKNI
IKLLKEKGRLVNASTFKHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLDCNGKCYWVP
EFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFQEVVCVGSIAELEELTGVKVTD
LHRENIDNLTIPSRCGKGVLRRITEVFDCWFESGSMPYAQVHYPFENKKDFEDTFPADFI
AEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPGLIVQN
YGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAYRFLVQNVQRLEKEDDIQ
FLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVVPRLVRFVDMLTNWYVRT
NRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMMYQNLRHLIDPASVEEKD
SNSIHYLMLPQVRDNLIDKRIENAVSQMQSVIELGRVIRDRKTLPVKYPLKEVVVIHQDP
EALKDIQSLQKYILEELNVRQLTLSTDKDKYEIRLRAEPDHMVLGKRLKGAFKAVTASIK
ELTSEQLETFQKTGSIVVDGHELHEEDLRLMYTFDQTSGSAAQYEAHSDAQVLVLLDVTP
DQSMVDEGVAREVINRIQKLRKKAHLVPSDEITVYYHCQPKGEYLASVIEAHTDFILATT
KAPLLPFPVPKTASIIIEENTQLKGSDLALTIVKGSSLLKAPPNGPACSYVNLRVKVNNK
EQEGVVLLENPKGDNRLDLDKLRKVCSSIFGINNTQLRFFSDRNELTNKVDLQAHSGKTL
LVTSGPSPPGAVPTTDTLLCPYVNLLLCNAQPAECQAGDVGTLLLVNPVGQNELDHSGLL
SEAAKVFGLRSRRLKLYLDQDLTNELPPETSVKSLNAKTLYVRVFPTTAEA
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagccaggctgggagctcttttcaagtctgagagtgaatataccattttggac
aaatttcctggaaaggtcctaaaaggaaaaaagtacaaaccactttttcactacttcatt
aagtttgcagagaaaggagcattccaggtactgacggataactacgtcaaggaggaggag
ggtaccggggtcgtccaccaggccccttactttggagccgatgattacagggtatgcgca
gaatacaacatcatccagagagaccaagctccgatctgccctgtggatgcctccggttgc
ttcacctcagaggtcacagattttgctggacagtacgtcaaagatgctgacaagaacatc
attaagttgctgaaggaaaaagggcgcctggtcaatgccagcactttcaaacatagctac
cctttctgctggaggtctgacactcccctgatctataaagctgtccccagctggtttgtg
cgagtggagcacatggttgaaaaactgctggattgcaatgggaaatgctactgggtcccg
gagtttgtgcgtgaaaagcgttttgggaactggctcagagatgcacgcgactgggcaatt
tcaagaaaccgttactggggcacaccaatccctctctgggtcagcgatgacttccaggag
gtggtctgtgtggggtccatcgctgaactggaggagctgactggagtcaaagtaaccgat
ctgcatcgggaaaacattgacaacctgacaatcccgtcacggtgcggtaaaggcgtcctg
cggaggattacagaagtgtttgactgctggtttgagagtggcagcatgccatacgcccag
gttcactacccattcgagaacaagaaggattttgaagacaccttccctgctgactttatc
gctgagggcattgaccagaccagaggatggttctacaccctgttggtcctctccacagcg
ctgtttgggaaacctccctttaagaatgtcatcgttaatggcctggtgctggcgagcgat
gggcagaagatgagcaagcgtaagaagaactacccagaccctgggctgattgtgcaaaac
tatggcgccgatgccctcaggctttacctcatcaactcacctgtggtgagggcagagaac
ctgcggttcaaggaggaaggtgtgcgagacgtgttgaaagatgtgttcttgccgtggtac
aacgcttatcgcttcctggtgcaaaatgtccagagattggaaaaggaagatgatattcag
ttcctgtacaatgaaaacactgcgaagcagagtgacaatattatggacaagtggatccag
tccttcacacagtctctcatccagttctttaaggctgagatggatgcttatcgcctatac
acagtggtgcctcgcctggtcaggtttgtggacatgctcaccaactggtacgtcaggacc
aacagacgccgcttaaagggcgagagtggtactgaggattgcctgtgggcgctggagaca
ctcttcagtgttttgttctccatgtgcaggttgatggctccctttacacccttcatcact
gaaatgatgtaccaaaatctgcgtcacctcattgaccctgcttctgttgaagaaaaggac
tccaacagcatccactatctcatgctgccacaagtcagggataatttgattgacaagcgt
attgaaaatgccgtctcccaaatgcagtctgtgatcgagctgggaagagtgattagagac
aggaagacccttcctgtcaagtacccattgaaggaggtggtagttatccaccaggacccg
gaggctctaaaagacatccagtctttgcagaaatacatccttgaagagctcaatgtgcga
cagttgacactttccacagacaaggacaagtacgagatccgcctgcgagctgagcctgac
cacatggtgctgggcaagagattaaagggggccttcaaagctgtgactgcttctatcaag
gagctcaccagtgaacagctagagaccttccagaaaacaggttccattgtggtggacggc
cacgagctccatgaggaggatctgaggttgatgtacaccttcgatcagacttctggctct
gctgcacagtatgaagcacactctgatgctcaggtccttgtgctgttggacgtgacccca
gaccagtccatggtggatgagggtgttgctagagaggtcatcaaccgcattcagaaacta
cgcaagaaggcgcatttggtgccatccgatgagataactgtgtactaccactgccagcca
aagggggagtacttggcatctgtgattgaggctcacactgacttcattctagctaccacc
aaggctccccttctgcccttccctgtcccaaaaactgccagcatcatcattgaggaaaat
actcagctgaaggggtcagacttggcgttaacaatagtgaaaggatcttcacttcttaaa
gcgccaccaaacggaccagcttgctcctacgttaacctgcgagtaaaagtcaacaacaaa
gaacaggagggcgtagtgttgctagagaatcccaaaggggacaacagactagacttggac
aaactgaggaaagtgtgcagcagcatctttggaatcaataacacccagctcaggttcttc
agtgatcgaaatgaattgacaaacaaagtggacctgcaggcccacagtggtaaaactttg
ttggtgacttcaggcccctcccctcctggcgctgtgcccaccaccgacaccctgctgtgt
ccctatgtaaacctgttactgtgcaacgcacagccggctgaatgccaggctggagatgtt
ggcaccctccttctggtgaatccagttggccagaatgagctcgaccactccggcctgctc
tctgaagctgccaaggtgtttggtctccgcagcaggcgcctcaaactctacctggaccag
gatcttactaatgaactgcctcctgaaacatctgtaaaatctctcaacgccaaaactctg
tatgtgagagtttttccaaccaccgctgaagcataa
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