Cyprinodon variegatus (sheepshead minnow): 107101831
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Entry
107101831 CDS
T06110
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04115
p53 signaling pathway
cvg04210
Apoptosis
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107101831 (apaf1)
04115 p53 signaling pathway
107101831 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107101831 (apaf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
NB-ARC
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
DSE1_N
WDR90_beta-prop_4th
Beta-prop_WDR41
NBCH_WD40
CARD
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ASA1
Beta-prop_Aladin
Beta-prop_EIPR1
CFAP251_N
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_Vps41
eIF2A
WD40_RFWD3
WD40_like
PAC11
CARD_2
Beta-prop_SPT8
UCP007778
Beta-prop_Nup120_160
AAA_16
WHD_Dark
NACHT
Motif
Other DBs
NCBI-GeneID:
107101831
NCBI-ProteinID:
XP_015256379
Ensembl:
ENSCVAG00000012121
UniProt:
A0A3Q2FTF0
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MALEERARSSLMRFHHQLEQDIKPQFLMDHMISDGVMTVDEEEKIRIQPTRKDQAAALIK
LVLEKDNRCFISFYNALVKEAYDDLARLLQKDLPDVSVDGNKSSFDSLSYVQRVLSEGGV
PQRPVVFVSRPELLNKVREKLYLLQKDAGGWVTVFGMAGSGKSVLAAEAVRDHGLIEECF
PGGVHWLSIGQLEKPDLLVKIQSLCFRLEQSQDSQSNIRPPTSLDEAKERLRFLMLRRYP
RSLLILDDIWDSSVLKVFDIHCRILLTTRNRSLADSVSGPKYEVEVESGLDDKKALEILA
LYTNMSSNTLPEEARSIVRECKGSPLVVSLIGALLKEKPDRWPYYLRQLQQKQFKRIKKS
TSYDYHALDQAMAASIEVLPDEHRELYKDLTVLEKDVKIPAKVLSVLWDLEPEEVEDILQ
EFVNKSLLFVDRNSKPHLYYLHDLQLDFLVEHYRNQIESLHSKVVHQYQHHYREAPPMSG
DEECLYWIRFLTYHMAKANLSQELYSLMFSLDWVCIKAKIMGPAHLINDYVEYGPILDQE
NSEVRSQFQEFLSLSGHRLEQRPFPDVVQLALSQPHSSEVYKQARQQALNRAKSGKLYFE
LINKSSVENLSRLVIHPHLGSIYSACFSHDGTKIASCGASKTLKVFKSTSGEKLSEIQAH
DEEVLCCAFSPDDRLLATCSSDRKVKLWNIQQGKLLRVFEEHEEQVNHCEFTNTTRRLLL
ATCSNDSLLKIWNLNKPSSQNTLFGHSEPVNHCCFSPDDSYLSTSSNDGTVKLFQVSSAN
EWKTIDVKSFFSESENEEVLVKCSTWTGDGTRIICAARNAVLVFDVQTSDMLLEIRTNRL
STVQYCHACPTSNLLALAFSNYAVELWDLEENKKMADCSGHLSWVQRVQFSSDGSQLLSC
SDDQTVRLWETKKVHTSSAICLKRDSDVIFHDEEIIVSAADNCNRLQVRDGRTGSVLFQS
EELPSRIRCTCLCRNPSAVLLGQENGELQVLELPSGKLLATLLGHTKTVLHCQFCHGGQT
LITSSEDATIRVWRWKSGECKVLQGHKEQVRCFSLLSDSTNESKLLSWSFDGTVKVWDIE
SGEKLQDMEAHQGAILSCHISPDGCLFATTSADKTTKLWSCESWQCVFTLRGHHECVRSC
RFSWDSKRLATGDDNGEIRIWRVEDGSLLKVCAQESKDGTDSLHGGWVTDLHFSPNNSVL
VSTGGYIKWWNVARGEALQTFYPSGSALKKIHVSPDFSTFVTIDNIGILYILKRVA
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggccctggaggagcgggcacggagcagcttgatgcgctttcaccaccaactggagcag
gacatcaagccccagttccttatggaccacatgatcagtgatggtgtgatgacagtggat
gaggaggagaagatcaggattcagcccaccagaaaagaccaagctgcagcgctcattaag
cttgtgctggagaaagacaatcgttgcttcatttccttctacaatgcgctggttaaggag
gcatatgacgatctggcaagactgctgcaaaaagacctaccagacgtgtcggtggatgga
aataaaagctcttttgacagtttatcttatgtccagcgtgtgctcagtgaaggtggagtc
ccgcagaggcctgtggtgtttgtcagtagaccagagttgctgaataaggtcagggagaaa
ctttatttgctccagaaagatgcaggtggctgggtgaccgtgtttggcatggctgggtca
ggcaagtccgtgcttgcagctgaggccgtcagagaccatggactcatagaagaatgtttc
ccagggggggttcattggctttccattggtcagctggagaaaccagacctgctggtgaag
atccagtcactgtgttttcgtctggagcagagccaggattcccagtcgaatattcggccg
cccacatctctcgatgaagctaaggagcgcctgcgcttcctgatgctgcgcaggtatccc
agatctctacttatccttgatgacatctgggacagctcagtgcttaaagtgtttgacatt
cactgtcggattcttctgaccaccagaaatcgaagcctcgctgactctgttagcggtcca
aaatatgaggtggaagtagaaagtggtctggatgataagaaggcactggagatcctggcc
ctgtacacaaatatgagctcaaacacgttacctgaggaggctcgcagcatcgtcagagaa
tgtaaaggctctcctctggtggtgtctctgatcggcgctctgctcaaagagaaacccgac
cgttggccttactacctccgccagctgcagcagaagcagtttaagcgcataaagaagtca
acatcgtatgactatcatgctttggatcaggccatggctgcaagcatcgaggttttacca
gatgagcatcgggagctctacaaagacctgactgtgctggaaaaggatgtcaagattcct
gcaaaggtgctgagtgttttatgggatctggagccagaggaggtggaggacattctccaa
gaatttgtcaacaaatctctgctttttgtagacagaaactctaaaccccatctgtactac
cttcatgacctgcagctggacttcctggtggagcattaccgaaatcaaatagagagtctc
cacagcaaggtggtgcaccagtaccagcatcactacagagaggctcctcccatgtctgga
gatgaggaatgtctgtactggatccggtttctgacctatcacatggctaaagccaatttg
tctcaggagctctactcactcatgttctcgctggactgggtctgcatcaaggccaagata
atgggaccagcccatctcatcaatgactacgtggaatatggacccattctggaccaagag
aacagtgaagtgcgaagccagtttcaggagtttctgtctcttagcggccaccgcctggag
cagcgtcctttccctgacgtggtgcagctcgctttgtctcagccacactcctcagaggtc
tacaaacaagcccggcagcaggctctgaaccgggctaagagtgggaagctctactttgaa
ttaataaataagagcagtgtggagaatttgtcccgtttggtaattcaccctcacctgggc
tccatctactccgcctgcttttctcacgacgggaccaaaatcgcttcttgtggagcaagc
aagacgctgaaggtatttaaaagcacctctggtgagaaactctcagagatccaggcccat
gatgaagaagtcctctgctgcgccttctcccccgatgaccgtcttctagcaacctgctca
agcgacaggaaagtcaagttgtggaacatacagcaaggcaagctactgagggtctttgaa
gagcatgaggagcaggtcaaccactgtgaatttaccaacacaacacggcgcctcctactg
gccacatgctcaaacgacagcttgttaaagatttggaatctgaacaagccgtcctcccag
aacacactgtttggtcactctgagccagtgaaccactgctgtttctccccagatgatagt
tatctgtccacttcgtccaatgacggcaccgttaagttgttccaggtgtcatcagccaat
gaatggaagacgatcgacgtgaagagcttcttttcagaaagcgaaaatgaggaagtgctt
gtcaaatgcagcacctggaccggcgacgggacacgcatcatatgtgccgccagaaatgca
gttttggtgtttgatgtccagacgtcagacatgttgctggagatcaggactaatcgtttg
agcacggtccaatactgtcatgcttgtcctaccagtaacctgctggcactagcattctct
aattatgctgtggagctgtgggatctggaagaaaacaaaaagatggccgactgcagcggc
cacctgagctgggtccaacgggttcagttctctagtgacggctcacagcttctctcctgc
tccgacgaccagacagtcaggttatgggagaccaagaaggtccacacgtcttcagccatc
tgcctgaagagagattcagatgttatttttcatgatgaggaaattatcgtatcggctgca
gacaactgcaacagactgcaggtgcgggacggcagaacaggatctgttcttttccagtcg
gaagagttgccatctaggatccgatgtacgtgtttgtgcaggaatccatccgcggtgttg
cttggacaagagaatggagaattgcaggtgttggagcttccctctgggaagcttttagcc
actctgctgggacacactaagacggtgcttcactgccagttctgccacggcggacaaaca
ctcatcacctcatccgaggacgccaccataagggtgtggaggtggaaatcaggcgagtgt
aaagtgcttcagggtcacaaggagcaggtccgatgtttctctttgctctctgactcaaca
aatgaatcaaagctcctctcctggtcctttgatggaactgtgaaggtgtgggacattgag
agcggggagaaactgcaggacatggaggctcatcagggagctattctgtcctgtcacatt
tcgccagacggatgtctctttgcaaccacctctgctgacaaaaccactaagttgtggagc
tgcgagtcctggcagtgcgtcttcaccctgagaggtcatcatgagtgtgtccgaagctgc
cgcttctcttgggatagcaaacgccttgctacaggagacgacaacggagagatccggatc
tggagggtcgaagatggctctctactgaaggtctgtgcccaggaaagtaaagacggcacg
gattctctccatggcggttgggtgactgatctgcacttctccccgaacaactctgtgctc
gtttcgactggtggctacatcaagtggtggaacgtggcgagaggggaagccctgcagact
ttctatccatcaggaagtgctctgaagaaaatccacgtgtctcctgacttctccaccttt
gtcaccatcgacaacatcggcattctctacatccttaagagggtggcataa
DBGET
integrated database retrieval system
