Cyprinodon variegatus (sheepshead minnow): 107102307
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Entry
107102307 CDS
T06110
Symbol
plod3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00310
Lysine degradation
cvg00514
Other types of O-glycan biosynthesis
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107102307 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107102307 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107102307 (plod3)
Enzymes [BR:
cvg01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
107102307 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
107102307 (plod3)
2.4.1.66 procollagen glucosyltransferase
107102307 (plod3)
Glycosyltransferases [BR:
cvg01003
]
O-Glycan biosynthesis
O-linked Gal type
107102307 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
DUF6492
Motif
Other DBs
NCBI-GeneID:
107102307
NCBI-ProteinID:
XP_015257042
Ensembl:
ENSCVAG00000015237
UniProt:
A0A3Q2D314
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MEPLCVCSYDVIFAGGPEELLSKFSALGHRVVFSAEGFCWPDQRLASKYPQVHSGKRYLN
SGGFIGFAPDLSAIVQQWKFKDNDDDQLFYTKIYLDKKQRTKFNMTLDHRSRIFQNLNGA
IDEVVLKFERAKVRVRNVAYDTLPVIIHGNGPTKXQLNYLGNYVPTAWTYENGCGVCDDD
LLLLSDAADEELPLVFVAVFIEHATPFMEEFLERLSTLNYPKTRIRLFIHNNVVYHEQHV
QRFWERHRALFPDAVMVGPEEGLQEDQARTMAIEACKKNPDCDYYFSIDSDVALTNPDTL
RILIEENKSVIAPMLSKHGKLWSNFWGALSPEGFYSRSEDYIEIVQGKRIGVWNVPYITQ
VYLIRGAVLRSKLAQVSIFVDEGMDPDMVFCRSFRDQGVFMFVSNRDEFGRLVASSNFNT
SRLYPDMWQIFDNPLDWREKYIHENYSKIFEEGSDAVEQPCPDVYWFPAFSDKMCDQLVE
TMEDFGQWSGGSHKDERLAGGYENVPTVDIHMNQIGFEKEWLKFLKDYIAPVTEKLYPGY
YPKAHSIMNFVVRYRPDEQPSLRPHHDSSTFTINIALNRKGVDYQGGGCRFLRYDCKVES
PRKGWSFMHPGRLTHYHEGLPTTQGTRYIMVSFVDP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaacccctctgtgtctgcagctatgacgtgatcttcgctggaggtccagaggagctg
ctctccaagttctctgctctgggtcacagggtggtcttctcagctgaggggttctgctgg
cccgaccagcgcctggcctctaaataccctcaggtgcattctgggaaacgctacctcaac
tcaggagggttcatcgggttcgctccggacctcagcgccatcgtccagcagtggaagttc
aaggacaacgatgacgaccagctgttctacaccaagatctacctggacaagaagcagagg
accaagttcaacatgacccttgatcaccgctccagaatcttccagaacctgaacggagcc
attgacgaggtggtcctgaagttcgagagggcaaaggtcagagtgaggaacgtcgcctac
gacacgcttcctgtcatcatccatggcaacggacccaccaagntgcagctcaactacctg
gggaactacgtccccacagcctggacctacgagaacggttgtggggtctgtgacgacgac
ttgctgctgctcagcgacgctgcggacgaggagctgccgctggtctttgtggcggtcttc
atcgaacacgccacgcccttcatggaggagttcctggagcggctcagcaccctgaactac
ccgaagaccaggatccgcctcttcatccacaacaacgtggtgtaccacgagcagcacgtc
cagcggttctgggagcgccacagggctctgttcccggacgccgtgatggtgggacctgag
gagggcctgcaggaggaccaggccaggaccatggccatcgaggcgtgcaagaagaacccg
gactgtgattattacttcagcatagactcggacgtggcgctgaccaacccggataccctg
aggatccttatcgaggagaacaagtccgtcatcgcccccatgctgtccaaacacgggaag
ctgtggagtaacttctggggcgctctgagtccagaggggttctactcccggtccgaggac
tacatcgagatcgtccagggcaagaggataggcgtgtggaacgtgccgtacatcacccag
gtctacctgatccggggcgccgtcctgcgctccaaactggcccaggtcagcatcttcgtg
gacgaggggatggacccggacatggtgttctgcaggagcttcagggaccagggcgtcttc
atgttcgtgtccaaccgggacgagttcggccgcctggtggcgtcctccaacttcaacacg
tccagactctacccagacatgtggcagatctttgacaaccctctggactggagggagaag
tacatccatgagaactactccaagatcttcgaggaggggagcgacgccgtggagcagccc
tgtcctgatgtctactggttcccagccttcagcgataagatgtgtgaccagctggtggag
accatggaggactttggccagtggtccggaggctcccacaaggatgagcgtctggcaggc
ggctacgaaaacgtcccgactgtggacatccacatgaaccagatcggctttgagaaagag
tggctgaagttccttaaagactacatcgcccccgtcactgagaagctctacccaggatac
taccccaaggcccactccatcatgaacttcgtggtgcggtaccgtccagacgagcagccg
tctctgcgaccgcatcacgactcctccaccttcaccatcaacatcgccctgaacaggaag
ggcgtcgactaccagggcggaggctgcaggttcctgcgctacgactgcaaggtggagtct
cccaggaagggctggtccttcatgcacccggggcgcctcacacactaccacgagggcctg
cccaccacccagggcacccgatacatcatggtgtccttcgtggacccctga
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