KEGG   Cyprinodon variegatus (sheepshead minnow): 107102329
Entry
107102329         CDS       T06110                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107102329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvg03000]
    107102329
   04121 Ubiquitin system [BR:cvg04121]
    107102329
   03036 Chromosome and associated proteins [BR:cvg03036]
    107102329
Enzymes [BR:cvg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107102329
Transcription factors [BR:cvg03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107102329
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107102329
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107102329
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107102329
SSDB
Motif
Pfam: zf-CXXC PHD_4 F-box-like JmjC JHD F-box Cupin_8 PHD Mito_fiss_reg LRR_6 BUD22 Nop14 LRR_At5g56370
Other DBs
NCBI-GeneID: 107102329
NCBI-ProteinID: XP_015257074
LinkDB
Position
Unknown
AA seq 1263 aa
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRTFDLEEKVSSERFSSDRIVRMEGKDF
TYEFVQRGGLRDPILFEKPDGLGLKMPEPDFSVNDVKTFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPVSQRDKLYNVISLEFSHTKLENLVKRPTTVELIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHILKGRKVFWLIPPTDPSLE
LYENWVLSGKQGDIFLGDRVSDCQRIELKPGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPMKFRCPFFYEMCWYVLERYVYSLTKTSYLTPEFQKYSLGTA
RELQEEGSGKNEEPSGAQSEKSPSKVHLTPLELEGLWSLIGKLETLQSNKKCVPAGIQNA
STLMTHIKALLKEHANDNPKLAYTGKPIVKWPPRPSWYQPPPPPPPPPPPPAPRPKPPSA
TTVQRPQKPASMSSLRRRRVRCKRCEACIRPECGECNFCRDMKKFGGPGKLKQTCVLRQC
LSPGLPLSAVCEICKEPNQEETGDPSLTLMECSSCAQIVHPACLTVRQEVPLWFGVNKII
IYPSAGNLERSAFYDIIRSQKLKNPEGRHSKAVALLNKNLMKLKFLSLRLSSPHVQKRKS
SSLLDARIAKIYRRHLHSQDGEDSASDDDNSSHRRRLALSAHGGGHMSRKAFGANRRGLL
RGGLSHKGSRGGLGAGGSMSGLRLKRGVAMREAGRRGRVRLRGGSRMQRRGDDSEESDDD
EDDDDDDDDDDDDYDEEEGESEEEKEYLRHKHRRRRRDYDEDEDSEGQDYDPEEEEVDTA
EDEELKKEEDEEEDGRWDSDPEPPVLLVSDLNDELLSGSYLTVTLQQPHRTKSQSGSIVP
KLEAAMGLRSAAGGGGQQGFIQRKAAHSKPSRVRGADSADTFTPRGPGRPRLRGSQGEKS
SRTYSASSSEEDQAAAPAPSSLLSLPSFKDAGSDRGGEKEIWVSVFRYLNRAELLACMTV
CKAWYKWSCDKRLWSHIDVSRCNPLSNQALAGIIKRHPTSLDLSWTPLAMRQLNCLLTRL
PGLRELRLTGLPWSCLSALVSPTLPQLQLLDLRWCEGIREAQIKEIITPPGLESSRSRLR
NMVTLRLSGLDISESTLRLLQRHMPHLQTLDLAHCKNVTDSCITLLAAAGTHTRNNLSEL
TLAGCNQLSDGCLSYMKRFSSLTLLDLRGCKGVSRRACDAFISDLSHVALFCMMEEKLIQ
RLD
NT seq 3792 nt   +upstreamnt  +downstreamnt
atggatgattcaaagccacgctacagcaaaaggctgcgggccggaactagaagacgttac
catgacgatggcatctctgatgaggagatcgatggaaggaggacgtttgacttggaggag
aaagtcagcagcgaaaggttcagttctgaccggatcgtccgcatggaaggaaaagacttc
acttatgagttcgtccagagaggaggcctgagggacccaatcctgtttgagaagcctgat
ggcctgggtctgaagatgccagaaccggacttcagtgtcaacgacgtcaagacgtttgtt
ggttccagacgcatgatagatgtgatggatgtgagcacccagaaggggacagagatgtcc
atggcccagtggacgcgttactacgagactcctgtgtctcagagagataaactctataac
gtcatcagtctggagttcagccacaccaagctggagaatctggtcaagagacccaccacg
gtggagctcatagactgggtggacaacatgtggcctcgtcaccttaaagagagacagagg
gattcaaccaactccatcaatgacatgcagtacccaaaggtccagaagtactgcctgatg
agtgtccaaggctgctacacagacttccacatcgactttggagggacgtccgtctggtac
cacatcctgaaagggaggaaggtgttctggttgatccctcctacggatccaagcctggag
ctctatgagaactgggttctgtctggaaagcagggagacatttttctgggagaccgagtg
tctgactgtcagaggatcgaactgaagccgggctgtaccttcatcatcccctcaggttgg
atccatgccgtctatacccccgtggactccatggtgtttggaggaaacttcctgcacagc
ttcaacatccccatgcagctgaacatctgtaacatagaggacagaacgcgggttcctatg
aagttccgctgtcccttcttctatgagatgtgctggtacgtgctggagcgctacgtctac
agcctaacgaagacctcttacctcacacctgagtttcagaaatactctctgggtacagct
cgtgagctgcaggaggagggttctggtaagaacgaagagccttcaggcgcccagtcggaa
aagtccccatccaaagtccatttgactcccctggagctggaggggctgtggagtctgatc
ggcaaactggagacgctgcagtccaacaagaagtgcgttccagctggaatccagaacgcc
tccacgctcatgacgcacatcaaggctctgctgaaggagcacgctaatgacaaccctaaa
ctggcgtacactgggaaacccatcgtcaagtggccgcccaggccctcatggtatcagccg
ccgccgccgcctcctcctcccccaccgccaccagcccctcgtcctaaaccaccctcagca
accaccgtccagcgtcctcagaaacccgcctccatgtcttcactgaggcggcgccgagtc
agatgtaagcgctgtgaggcctgcattaggccagagtgtggagagtgtaacttctgcaga
gacatgaagaagtttggaggaccagggaagctcaagcagacctgcgtgctgcggcagtgc
ctctcaccgggccttcctctgtctgctgtgtgtgagatctgcaaagagcccaatcaggag
gaaactggagacccttccctcaccctgatggagtgttccagctgtgcccagatcgtccat
cccgcctgcctcacggtacgtcaggaggttccgctttggtttggagttaataagatcatt
atttatccctctgcgggtaacctggagcggtctgcgttctacgacatcatcaggtctcag
aaactaaagaaccctgagggacgccacagtaaagctgttgctctgttaaataaaaacctg
atgaagctgaagtttctgagcctgcgtctttcctcccctcatgttcagaaaaggaaatcc
tcatctctgcttgacgctcggatcgcaaagatctacagacgccacctccacagccaggat
ggggaggactctgccagtgacgacgataactcgtcccacagaaggagattggctctctct
gctcacggaggcggccacatgtccaggaaggcgttcggtgccaacaggagaggtctgctg
cggggcggcctgtcccacaaagggagcagaggggggctgggggcgggcggctccatgtcg
ggcctcagactaaagaggggcgtggccatgagggaggcggggcggagaggccgggtcaga
ctccgcggaggctccaggatgcaaaggaggggcgacgactcagaagagtcggatgacgat
gaagacgatgatgatgacgacgacgacgatgatgacgattatgatgaagaagaaggcgag
agcgaggaagaaaaggaatatctgcggcacaaacacaggagacgcaggagggactacgat
gaagacgaggatagcgaagggcaggactacgaccctgaagaagaggaggtggacaccgct
gaagatgaagagctgaaaaaggaggaggatgaggaggaggacggtcgctgggattcagac
ccagaacctccggttctcctggtgtccgacctgaacgacgagctgctgagcggctcctac
ctgacggtcaccctgcagcagcctcacagaaccaagagccagtcaggctccatcgtgccg
aagctggaggccgccatggggctgaggtcagcagcagggggaggtggtcagcagggcttc
atccagaggaaggcggctcattccaaaccttccagagtccgaggtgctgattctgccgac
accttcacccccagaggacccggcaggcctcgtctgcgaggaagtcagggagaaaaaagc
agcagaacgtactctgcctcttcctctgaggaagaccaggctgctgctcctgctccgtcc
tctctgctgtctctgccgtcctttaaggacgcaggcagcgatcggggcggggagaaggag
atctgggtgtctgtcttcagatacctgaacagagcggagctgctggcctgtatgaccgtc
tgtaaagcctggtataaatggagctgtgacaaacgcctgtggagtcacatcgatgtgagt
cggtgcaacccgctcagtaaccaggcgctggcgggcatcatcaaacgccatcccacctct
ctggacctgtcctggacgccgctggccatgaggcagctgaactgcctgctcaccagactc
ccaggtctgagggagctgaggctgaccggtctgccctggtcctgtctgtcagcgctggtc
tctcccaccctgccccagttacagctgctggatctacgctggtgtgaaggcatcagagag
gcccagattaaagagatcatcactccaccaggtttggagtcgtcgcgcagcaggctgagg
aacatggtgacgctgcgtctgtccggcctggacatcagcgagtccaccctcaggctgttg
cagcgccacatgccccatctgcagactctggacctggctcactgcaagaacgtaacggat
tcctgtatcacgctgctggcagccgctgggactcacacccgcaacaacctcagcgagctg
actctggctggttgtaaccagctgagcgacggctgcctgtcctacatgaagaggttctcc
tctctgactctgctggacctcagaggctgtaagggtgtcagcagacgggcctgcgacgcc
ttcatctctgacctgtcccatgttgccctcttctgtatgatggaggagaagctcatccaa
cgcctggactga

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