Cyprinodon variegatus (sheepshead minnow): 107103107
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Entry
107103107 CDS
T06110
Name
(RefSeq) msx2-interacting protein-like isoform X1
KO
K25100
Msx2-interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107103107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107103107
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107103107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
107103107
NCBI-ProteinID:
XP_015258119
Ensembl:
ENSCVAG00000009075
UniProt:
A0A3Q2CPN8
LinkDB
All DBs
Position
Unknown
AA seq
3160 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSSSREVAGFSRGTVGPVFGPPVSL
HTREGRYERRIDGSSESRERAYDHSPYGHHERSGTFDRRHYNAEYYRDRAVFAAAGPGSS
AIGGSFEAADPHFESRIRDPFTLTSSTRRDLYRDDRGRRVDRAYHHRRSRSSHSSQSRHP
SPQRAAGQTPKTPHSPKRTPLSPGRGPRSRSHSRSSSSDSVSSTSSTGSGSDSNSSSSDG
SQARSVQSSAAHASQTCMVMDSEEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKYGKVN
SVQIHGASEDRYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETENENDYRPLD
GRLDEFHPKATRTLFIGNLEKTTTYQQLLDIFQRFGEIVDIDIKKVNGIPQYAFVQYSDI
GSVCKAIKKMDAEYLGSNRLKLGFGKSIPTTCVWLDGLAPNITEQYLTRHFMRYGHVVKV
VFDRLKGMALILYNNTDFAQQAVRETKGWKIGGNKIKVDFASQESQNAFYRSMQASGQDI
RDFYEVPPERREDRRPPYHEFTAERAYYENLRTTDLYPEDARREYAARSRERFPGLEHYQ
GEHFDPRYHEDPRDYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHPRRAIT
PTISPSSSERATRDSERRVYSQSSERSGSVSSMSPSHFDKSEKNILDHAAKGEKSSQPDR
VTGVEKPKRPKRKDKTDKEKAERGKSRKPKPQSPANPIPETETDAGLDGGSGRGRGSDQD
VHEKQKCKLEGDNLSGSQLTALQESVKSEMNKSDIAEVDGKTRLKKHPKTDVGNDGKELV
VDTDRLAARKRRFGDLGGKTARQKRSRLEEEDGSQSSDFGSNNSYIKEPDTEKHKDPQRR
DARLKTEKSVTQKDGLEDLRGQRDIPEGSIELPESKRQGSTSSRRVSLEGNSDQGGIREQ
EQNALFKLNQNPENKNTKNKEDHVDIDLSQSYRKQMEQNRRLHLQQQQQRDSDKLKKAEN
LQRNEAEDLEHRSLVHEVGKPPEDVTDNFPSHKLSEQFEAEPGIKRERVYRRQKSEDPDW
SGTPSPGHQVFTHVDEEFMDASLKELSRNNQKIHPELELLVKRTQNTQVTKTNTPMNIVE
DDPQKRWESRVKQEILPNVNFSRNLSKTLQNRKPSDYGLWHDLEPGEVRSDSEEDRENKP
LSPAPSTSMPFPERPRPDRFSDPKLAHLERNKFYSFALDQTITPDTKALLERAKSLSSSR
EDNWSFLDYDSHFVNFRHQKDTEKVESAPRSTPSWYMKKKKRSGSEVKQDNRKEEPKPEE
QERRELFASRFLHSAVFELDSRRLQHLERKYEELELNQQASQQGAEGELETGPVVLFHSR
FLELTQLQQQKNKSQQLQEDKGNTVSTNENKEEKPSDLEQQAPRPNDTPESSVEAEIKPI
SPVEQVIPEQRLTPKLVSQPVIKDSPPLDQKCELLRPATDVCPPVKQEIKEEVKEREDII
PMLHPPTETITPEPVSETLDETKIAEEKQEFVEETKPLVAEQSHCPGSHEELVSISEPEL
GPETSQPEVPTSSSPNQSHLTEEASVIKEEPYSTCQTALESDGERKLEVGKEQVSADSDT
VEEPVSFQREKTKEFKTKKGKQSPAQVPVTPISASEKQATRKSERIDKDKLKRGSSPRAE
TKSTAKSPIPGSDHDQLKQSLPIRGRTRRNVKSIYATPVEEATPTRGKEITESLRPVRKR
PAEKEAAQHSTELEAPAPTPTKQRGRPPKNRKPVEEVSASKADKIKIDKDMDSNESESTE
GIQRLKGKSPHITKGQMPSAQGSKKGDKADATDEAQERNFTEADTTQQLSSLVKDSSVKS
DVNKSEKDKEGAELGKDKDVHEKICQGKSNGNNTDALVIEERLVPEKEKTTRGKLKSAGA
SKPHVLKDLQIRLNVTEVKDLLQLGDEEFGNQEDLSKKVRPDDLPEQASRCSTANKESPS
EEKEKEDIEASKSSSSQEQELEQAVENIAKLTDPAFPTEPPNPSVPPAEVKSDPEEEKPC
NPASETELMAAIDSITVEESSVPLTPAAPINTDVGSESEISEFVQPLKVEESETGNQEES
VLTNTPKKGWKGRPRTPKRAKAPKYARKDVKEEPSLGEELAVPIAERTASDVKIVSEKPP
PAAAAAVITPTPWKSEPELPAVKATESELTSSVEEQTQAMKPVPPQGQSPIYTKPQHLPA
DSVSPSLTSNRQNIRPIQTCRAPVSPPDWRQQSKDVFGSSANMSVAAKEGQPASDSINKE
HEQRTSDLRQILMKTKPVSLQGSSSAQTNLPSPRDQNPSESNPAITAAIQNRSPLRDSKT
PTQSASVVRTPSTLTSETKSVISVIASTATSVISRVCNPLESEEKPNLNSGNPSIDMHKT
AYRPSKDEGGPYHGPPDEAGARFIVDGPTYNSVSCSGLRVNTSEGVVVLSHSGQKTEGPQ
RISAKISQIPQATAGDIESQQLVSIPQIKQDVYAHSQSGHQKGPSQTDHVHPGKPQSALS
SIKQESSSLEKMEPSYQSGPQGVVKRLPGQGNQQVMGYHPDYMKLKHPKKMDNIDHGTDG
VKPPWTSTISPAISPHLPSPPGNHVGYVTAGDRAQAHLGTIKQEPRSPRKSGPPHPPFNK
VSSPLGSSSPKGIPVMLTSALNPMQQYMAGVHHPEQSVIMPPHNVPGGLGRMSPHCVSQT
RVNTPPLSVMNYVHGEQLPSPWSGSMQPRSSSPQAVSRDKVLKVNHGSLRGHEGEQEESR
HFHQAGRPSATLPSDSRGTLRTNVLETFIAQRDMRVHLHQTGEQRMTLDPHSGHIQETLP
PSVSPRAHILPKGVSEKDLKSLEAKRPHSPLPKDGMMGIRQSGPAVSSPQRVPLMPPGPS
GSFSEYPGMYPNRIHSQIPDTSVGHNQPPLNVTPCMGADLQTKPDGKIAQPVNMVQLLTK
YPIVWQGLLALKNDTAAVQLHFVCGNKALAHRSLPLQEGGALLRIVQRMRLEASQLESVA
RRMTGDSDYCLLLALPCGRDQEDVINQTQNLKAAFINYLQAKLAAGIINIPNPGSNQPAY
VLQIFPPCEFSESHLSQLAPDLLNRISSISPHLMIVITSV
NT seq
9483 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgtgaggag
aaaatcgtggaacattttaaaaggtatggccgagtggagagcgtcaaggttctgcgaaag
cgagggtcagagggcggtgttgcagcctttgtggattttgtggatatcaaaagtgcacag
aaggctcacaatgctgtcaataagatgggagacagggaccttcggactgactacaatgag
ccagggtcagtccctagtgctgtgcggggcctcgaagacagctccccctccagcagtcga
gaggttgcaggattctctaggggaacagttggcccagtgtttggcccacctgtgtcccta
cacacccgagagggacgttatgaacggagaatagatggtagctcagaaagccgtgaacgt
gcatacgatcacagcccatatggccaccatgagcgcagtgggacatttgacagacgtcac
tacaacgctgaatattaccgtgatcgtgccgtgtttgcagctgctggcccaggcagtagt
gccatcggagggagttttgaagcagcagacccacattttgagtctagaatacgagatcca
tttacccttaccagttcaacaagacgtgacctctacagagatgatagagggcgacgtgtt
gatcgagcttatcaccaccgtcgaagcagatcatctcattcctcccagtcaaggcaccca
tctcctcaacgggctgcagggcaaaccccaaaaactccccattctcctaaaagaacgcct
ttgtcccctggaagaggcccaagatcgagatctcacagcagatcatcgagctcggactct
gtcagcagcaccagcagtacaggcagtggcagtgattcaaacagcagctctagcgatggt
tcacaagcccgttctgtccagtcttcggctgcacacgcttctcagacatgtatggtgatg
gattctgaagagccacggaggagttttggaattaaagtgcaaaacttaccagtgcgctcc
acagatacaagtttaaaagatggactctttcatgaattcaagaaatatgggaaagtgaat
tcggtgcagattcatggggcgtcagaagatcgttatggtctagtgttcttcagacaacaa
gaggatcaggagaaagccctcagtgtctccaaaggaaaactcttctttggaatgcttatt
gaggtcacagcctggaacggtcctgaaactgagaacgaaaatgactacaggcctctagat
ggacgtctagacgagttccaccccaaggctacgaggacactgtttataggaaaccttgaa
aagaccaccacttatcagcagctccttgacatttttcagcgcttcggagaaattgttgac
atcgacatcaagaaagtgaatggaattcctcagtatgccttcgtccagtattctgatatt
gggagcgtttgcaaggccatcaagaaaatggatgcagaatatctggggagcaacaggctt
aagctcggttttgggaagagtattcctactacatgtgtttggcttgatggtttggctcct
aacattacagagcagtaccttacaagacattttatgcgctatgggcatgtagttaaagtc
gtatttgatcggctaaaggggatggcccttatcttgtacaacaacacagattttgctcag
caagctgtgagggagaccaaaggctggaagattggtggcaataaaattaaggtggacttt
gcaagtcaagaaagccagaatgcattttaccgctcaatgcaggcctctggtcaagacatt
agagacttctatgaagttccaccggaacgacgagaggatcgcagacctccttatcacgag
tttacggcagagagagcttactacgagaacttaagaaccactgacctttatccagaagat
gctcgtagagaatatgctgcgcgcagcagagagcgctttcccggactggaacattatcag
ggggaacactttgatccacgctatcatgaagacccaagagactacagggactatagagac
cctttcgagcaagacatcagaaaatacacctatattcaaagagagcgagaaagagagcgg
gagcgtttcgaggctgatcgtagcaggtggagcccatctcatccaaggcgagctattact
cccacaatatccccctcttcatcagaacgggctaccagagactcagagcgacgtgtttac
agccagtcatctgagaggagtggcagtgtgagctccatgtcgccttcacattttgacaaa
tctgaaaagaacatacttgatcatgcagcaaagggtgaaaagagctctcagcctgatcga
gtgacaggggtggagaaaccgaagcggcctaaaagaaaggataaaactgacaaagaaaag
gctgaaagaggtaaatcaaggaaaccaaagcctcagtccccagcaaacccaatacccgaa
acagagacggatgctggtttagatggaggatctggacgaggaagaggatcagatcaagat
gttcatgagaaacagaaatgtaagttggaaggagacaatctgtctggaagtcagttaact
gctcttcaagagtctgttaaaagtgaaatgaacaaatcagatatagcagaggtggatggg
aaaaccagactcaaaaaacatcctaagactgatgttggaaatgatggaaaagaattagta
gttgacacagatcgccttgctgcaagaaaaaggcgatttggagatttaggtggcaagact
gctcgacagaaaagaagcaggctggaagaggaggatggcagtcagtcatcagactttgga
tcgaataactcctatataaaagaaccagatactgaaaaacataaagatcctcagcgacga
gatgcacgacttaaaacagaaaaaagtgtcactcaaaaggatggactggaggatctcaga
ggacaaagagatatacctgaaggatctatagagctgccggagtcaaaacgacaaggaagc
acttcttccagaagggtctcattagaagggaattcagatcaaggcggtattagagagcaa
gaacaaaatgccttattcaaacttaatcaaaatcctgaaaataaaaacaccaagaacaag
gaggaccatgttgacattgacctctctcagagttatcgtaagcagatggagcaaaacaga
cgtctacacctgcagcagcaacaacagcgtgattctgacaaacttaaaaaagcagaaaat
cttcagagaaatgaagcagaggacttagaacatcgtagtcttgtgcatgaagttggtaaa
ccacccgaggatgtcacagataactttccatctcacaaactctctgaacagtttgaagca
gaaccagggataaagagagagcgtgtctatagaagacaaaaaagtgaagatcctgactgg
agtggtacaccctctccaggacaccaggtcttcactcatgtagatgaagaattcatggat
gcttctttaaaagagttgagtcgaaacaatcagaagattcacccagaacttgagctactg
gtgaaaaggactcaaaacacacaggtcaccaagacaaacacccctatgaatatcgttgaa
gacgacccacaaaagaggtgggagagcagagtaaaacaagaaatattacccaatgttaac
ttttctagaaacttaagtaaaactcttcagaaccgcaaaccttcagactatggcctttgg
catgatttagagccaggggaagtgagatcagactctgaagaggacagagaaaacaaaccc
ctctctcctgccccctccacatctatgccttttcccgagaggccaagacctgataggttt
tcagacccaaagctagcacatcttgaaagaaacaaattctattcctttgcacttgaccag
accatcacccctgatacaaaggctcttctggaacgggcaaagtcactctcatcatctcgt
gaggataactggtcatttttagattatgattcccactttgtaaatttccgacatcagaaa
gacacagagaaagtagaatcagctccaagatctacaccttcctggtatatgaaaaagaaa
aaacgaagtggatcagaggtcaaacaggataacaggaaagaagagcccaagccagaggag
caggaacgcagagaactatttgcctcacgtttccttcatagtgctgtgttcgagctggat
tctagacgacttcaacaccttgagcgcaaatatgaagaacttgagctaaatcaacaagct
agtcagcaaggggcagagggtgaacttgagactggcccagttgtcctttttcacagtcgt
tttttggagctcacgcaactacaacaacaaaaaaacaagagccaacagctgcaagaggat
aaaggaaacacagtatcaacaaatgaaaataaagaggaaaaaccatctgatctggaacaa
caagctccacggcctaatgacacaccagagtcgagtgtggaggcagaaatcaaacccatc
agtcctgttgaacaagttattcctgagcaaagactcactcctaaactagtttctcagcct
gtgatcaaagactcgcctcctttagatcagaagtgcgagttacttcgtccggctactgat
gtatgcccacccgtgaaacaggagataaaggaggaagttaaagaaagggaagatattata
ccgatgctccatccaccaactgagacaataacacctgaacctgtatccgagactcttgat
gaaactaaaattgctgaggagaagcaggaatttgttgaagagacaaagcccctagttgct
gaacaatcacactgtcctggttctcacgaagagttggttagcatatcagaaccagagcta
ggtcctgagacgtcacaacctgaagtgcctacatccagtagtccaaaccaatcccatctt
actgaagaggcaagtgtaatcaaggaagagccttattctacatgtcaaacagcattagag
tcagatggagagaggaaacttgaagttggtaaagagcaagtttctgctgacagtgacaca
gttgaagagccagtctcctttcaaagagaaaaaactaaagagttcaaaactaagaaaggc
aagcaatctcctgcccaagttcctgtaacaccaatctctgcttctgagaaacaagctaca
cgcaagagtgagcgcattgacaaagataagctgaaacgcggctcgtccccaagagccgaa
acaaagtccactgcaaagtctccgattcctggatctgaccatgatcaactgaagcagagc
ttaccaataagaggaagaacacgaagaaatgtaaaatctatttatgccactccagttgaa
gaagcaacaccaactcgtggtaaggaaataacagagtcactgcgccctgtacgaaagcgg
cctgcagagaaagaagctgcgcagcacagtactgagctggaggcaccggctccaactccc
acaaagcaacgtggtcgtcctcctaaaaaccgcaaacctgttgaagaggtttcagcttca
aaagcggacaaaataaaaattgacaaagacatggactcaaatgaatcggaaagcacagaa
ggaattcaaagacttaaagggaaatcccctcatattacaaagggtcaaatgccctcagct
caaggctcaaagaaaggggacaaagctgatgcaaccgatgaggctcaagagagaaatttt
acagaagcagatactacacaacagttatcaagtttggtcaaagattcttcagtaaaatct
gatgtaaataaaagtgaaaaagacaaagaaggtgcggaactgggtaaagataaagatgta
catgaaaaaatatgtcagggtaaatcgaatggtaataatactgatgctttagttattgaa
gagcgacttgtcccagagaaagaaaagaccacaagaggaaagctcaagtcagctggggct
tcaaagcctcatgttcttaaggacctccaaatcagactaaatgtcacagaggtcaaagat
cttcttcagctaggtgatgaagagtttggaaatcaagaagacctgtcaaaaaaggtcaga
cctgatgacctacctgaacaagcttcaaggtgctctactgctaacaaagagtcccccagt
gaggaaaaggagaaagaggacatagaagcttcaaagagctcatcctcacaggagcaggaa
ctggagcaggctgttgaaaacatagccaaacttactgacccagcatttccaacagaacca
ccaaacccttctgtccctcctgcagaggtaaaatcggatccagaggaggaaaagccttgt
aatcctgccagtgagacggagctgatggctgctattgattcaataactgttgaagaatca
agtgtacccctcaccccagctgctccaatcaacactgatgttggttcagaatctgaaatc
agtgagtttgtccagccactcaaggttgaagaatctgaaaccggtaatcaggaggaatct
gtcttaacaaatacacccaaaaagggttggaagggaaggcccagaacgcctaaacgagcc
aaagccccaaagtatgccagaaaagatgtaaaagaagaaccatcattaggtgaggagcta
gcagtccctattgctgaaaggacagcctctgatgtaaagattgtgtctgagaaacctcca
cctgctgctgctgctgccgttattacccctacaccctggaaatcagagcctgaacttcca
gctgttaaagcaacagaatcagagctgacatcgtccgtagaagaacaaacacaagccatg
aagccagtacctccccaaggtcagagtcccatatacaccaagcctcaacacttaccagct
gactccgtttctccttctctgacatcaaacaggcaaaatatcagacccattcaaacatgt
agagcccctgtttcaccaccagactggcgacaacagtctaaggatgtgtttggttcctct
gccaatatgtcagttgcagcaaaagaaggccaaccagcctcagactccattaacaaagag
catgaacaaaggacaagtgacttgaggcagattcttatgaaaaccaaacctgtttcactc
caaggaagtagttctgctcaaaccaatttgcccagccccagagatcagaatccttctgaa
agcaaccctgccattacagctgcaattcagaatagatccccgctccgggatagtaaaacg
ccaactcaatcagcatcagttgtccgaacaccctccacattaacctctgagacaaaatct
gtgatctctgttatcgcttctacggcaacatctgtcattagccgtgtttgcaaccctctt
gagtctgaggagaagcctaacttaaacagtggaaacccatctatagatatgcacaaaaca
gcctacaggcccagcaaagatgagggtggaccataccatggaccacctgatgaagcagga
gcacgcttcattgttgatggccccacttacaactctgtgtcttgctctggtcttagagta
aacacatcagaaggagtggtggtgctgagccactcaggccagaaaacagaaggaccccag
aggatcagtgccaagattagtcaaatcccacaagcaacagcaggcgacatagaatctcaa
cagttggtgtcgattccccagattaagcaagatgtatatgctcattctcagtcaggacat
cagaaggggccttcacagacagatcatgtgcatcctggtaaaccacaatcagctctgtcc
tcaattaagcaggaaagcagcagtttagaaaagatggagccttcataccagtcagggcct
caaggagttgttaagcgtctcccaggacagggtaaccagcaagtcatgggttatcacccg
gactacatgaagttaaaacatccaaaaaaaatggacaatattgatcatggtacggatgga
gttaagccgccgtggacctctaccatcagccctgctataagcccccatctaccttcaccc
cctgggaaccatgtaggttatgtcacagctggtgacagagctcaggcacatcttggcacc
attaaacaggagccaagatccccacggaaatcaggccctccccatcctcctttcaataag
gtgtcctcaccccttggctcatcatcacctaaggggatccctgtaatgttaacctctgct
cttaaccccatgcagcagtatatggcgggagtgcaccatccagagcagtccgttatcatg
ccacctcacaacgtgcctggaggcttgggaagaatgtctcctcactgcgtttcccagact
agggtaaacactccacctctgtctgtgatgaactacgtacacggtgagcagctgccttct
ccttggtccggttcaatgcagccacgatcctcctccccacaggctgttagcagggacaag
gtcctcaaagttaatcatggttctttgcgaggtcatgagggagaacaggaagaatctaga
cacttccaccaagcagggagaccatctgctaccctgccatctgattctcgaggaaccttg
aggacaaatgttttggaaaccttcatagctcagagagacatgcgtgtgcacctccatcaa
actggggagcagagaatgaccttggacccccattctggacacattcaagaaaccctacca
ccttctgtatcaccgagagctcacattttgcctaaaggcgtgtctgagaaggacctaaag
tctctggaagcaaagaggcctcactctcctcttccaaaggatggaatgatgggaatccga
cagtctggccctgcagtttcatctccccagagggttccactgatgccaccgggtcctagt
gggtcattctcagagtacccaggaatgtacccaaaccgcatccattctcagatcccagac
acgtctgttgggcacaaccagccaccattgaatgtgacaccatgtatgggtgcagacctc
cagacgaaaccagatggcaagatagcacagcctgttaatatggtccagttgctgacgaag
taccccatagtgtggcaaggccttctggcactgaagaatgacactgctgctgtccagttg
cattttgtatgtggaaataaagctctggctcatcgatcgcttcctctgcaagaaggaggt
gctttgctcaggattgtccagagaatgagactagaggcgtctcagttggagagtgtagcc
agaagaatgacgggcgacagcgattactgtcttctccttgctttgccatgtggacgagat
caagaagacgtcataaaccaaactcaaaatcttaaagctgcattcatcaactacttgcag
gccaaattggcagctggtattatcaacatccccaatccaggttccaatcagcccgcctac
gtgctccagattttcccaccctgtgagttttctgagagccacctatcacagcttgctcct
gaccttttgaacaggatctccagcatctcaccacacctcatgattgtcatcacctctgtg
taa
DBGET
integrated database retrieval system
