KEGG   Cyprinodon variegatus (sheepshead minnow): 107103549
Entry
107103549         CDS       T06110                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107103549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107103549
   03041 Spliceosome [BR:cvg03041]
    107103549
   03032 DNA replication proteins [BR:cvg03032]
    107103549
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107103549
Spliceosome [BR:cvg03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107103549
  U2 snRNP components
    107103549
 Complex B
  U1 snRNP components
    107103549
  U4/U6.U5 tri-snRNP components
    107103549
 Complex C
  U2 snRNP components
    107103549
DNA replication proteins [BR:cvg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107103549
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107103549
NCBI-ProteinID: XP_015258770
Ensembl: ENSCVAG00000014193
UniProt: A0A3Q2D0E4
LinkDB
Position
Unknown
AA seq 241 aa
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGGTVAVAAAGASIAGAPTQYPPGRGAPPPMARA
APPPGMMGPPPGMRPPMGPPMGMPPGPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPPR
P
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacggtgggaaagagcagcaagatgctgcagcacatagacttcaggatgaggtgcatc
ctgcaggatggtcggatcttcattggaaccttcaaggccttcgacaaacacatgaacctg
atcctgtgtgactgcgacgagttccgcaagatcaagccgaagaactcaaaacaaccagag
cgtgaggagaagagagttctaggtttggttctgctgaggggcgagaacctggtctccatg
acggtagaaggcccgccccccaaagacaccgggatcgcccgggtccccctggcaggtgtg
gctggaggtcctggtgtgggacgggcggcgggtcgtggggttcctgcaggagctccgatg
cctcaggctcctgccggtctggcagggccggtcagaggagtgggcgggccgtcacagcag
gtgatgaccccgcagggcagaggagggactgtcgccgtggcggcagcaggagccagcatt
gcaggggcacccacacagtacccacctgggcgaggggccccacccccaatggcccgggcc
gcgcctcctccagggatgatgggtccgcctcctggcatgcggcccccgatgggtcctcca
atgggaatgcctcctggtccgggtcgtggtgctccgatgggaatgccccctccaggcatg
aggccgccgccccctggaatgagaggaccccctcctccgggaatgagacctccccccagg
ccctga

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