KEGG   Cyprinodon variegatus (sheepshead minnow): 107104490
Entry
107104490         CDS       T06110                                 
Name
(RefSeq) LOW QUALITY PROTEIN: presenilin-2-like
  KO
K04522  presenilin 2 [EC:3.4.23.-]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    107104490
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cvg01002]
    107104490
Peptidases and inhibitors [BR:cvg01002]
 Aspartic peptidases
  Family A22: presenilin family
   107104490
SSDB
Motif
Pfam: Presenilin DUF3377
Other DBs
NCBI-GeneID: 107104490
NCBI-ProteinID: XP_015259976
LinkDB
Position
Unknown
AA seq 422 aa
MSASDSDEELYNERTALVPSENPAVPSYIPDLDHSPTEDSHSKAAGFGRRTRPGGGGGLD
QEAELEEEEEELSLKYGAKHVIMLFVPVTLCMVVVVTTIKSIGFYSEKTTQQLXVPVKRI
TVCISKYRSIPGLFSASCIVRLLHMVQLLIVETFRFXIIIFFVFFGAASEVFKTYNLAVD
YLTVAMIIWNFGAVGMVCIHWKGPLQLQQAYLIVISALMALVFIKYLPEWSTWVILSILF
LFTLPSCLAADLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMMWTVTMANPSDAQH
SDTDDEAELNSRREVPASRQPNQTQEDELEEERGVKLGLGDFIFYSVLVGKAAATGGDWN
TTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLIFYFSTDFLVQPFMDSLANHQF
YI
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagtgcatcggacagtgatgaggaactctacaacgagcggacggctctggttccatca
gagaaccccgcggttccgtcttacataccggacttggaccacagcccaacagaggactcc
cacagtaaagcggcggggtttggaaggcggactcgtccaggtggcggcggcggtttggat
caggaggcggaactcgaggaggaggaggaggagctgtccctgaagtacggagcaaagcat
gtcatcatgctgttcgtccccgtcaccctctgcatggtggttgtggtcaccaccatcaag
tccatcggcttctactctgagaagaccacccagcagctgtaggtcccggttaagcgaatc
actgtctgcatatccaaatacagatcaatcccaggcttgttttctgcatcctgcatagtc
cggctccttcatatggtgcagctcctgattgtggaaacattccgattctgaatcatcatc
ttttttgtttttttcggtgctgccagtgaggtgtttaagacgtataacctagcagtggat
tatctgacggtggctatgatcatctggaacttcggggcggtggggatggtgtgcatccac
tggaaggggcccctgcagctgcagcaggcctacctgatcgtcatcagcgccctcatggcc
ttggtcttcatcaagtacctccctgagtggtccacctgggtcatcctgtctattcttttc
ctgtttactctcccatcatgccttgctgcagacctcgtggccgtcctcagtcctaaagga
cccctccggatgctggtggaaacggcccaggagcggaacgaaccaatcttccccgccctc
atctactcctccgccatgatgtggacggtgaccatggccaatccgtctgatgctcagcac
tccgacacagatgacgaggcggagctaaatagcaggagggaagtgcctgcgagccgacaa
ccaaatcagacgcaggaagatgagctggaagaggaacggggcgtgaagttggggctggga
gacttcatcttctacagcgtcctggttggaaaagctgcagcgactggaggagactggaac
accactctggcctgcttcgtggccatcctcatcggtctgtgcctgacgctgctcctcttg
gccatctttaagaaagctctgcctgcactgcccatctccatcacctttggcctcatcttt
tacttctccactgacttcctggttcagcctttcatggacagcttagccaatcaccagttc
tacatctga

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