KEGG   Cyprinodon variegatus (sheepshead minnow): 107104506
Entry
107104506         CDS       T06110                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145  Phagosome
cvg04514  Cell adhesion molecules
cvg04672  Intestinal immune network for IgA production
cvg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107104506
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107104506
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    107104506
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107104506
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvg04147]
    107104506
Exosome [BR:cvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107104506
  Exosomal proteins of epithelial cells
   107104506
  Exosomal proteins of breast milk
   107104506
SSDB
Motif
Pfam: MHC_II_alpha C1-set
Other DBs
NCBI-GeneID: 107104506
NCBI-ProteinID: XP_015259998
LinkDB
Position
Unknown
AA seq 175 aa
MMMMKLLLFLCSVLWVSADVLHEELYILGCSDSDGEFMLSLDGEEKWFADFKKEKGEEPQ
PPFIDHISYPEGFYEQAVNDQQVCRFNMNLGRKALKGIPLEKDSALSFSPQLGDVYSCSV
EHPALQEPVTKMFDVDVHGPQPSVGPAVFCGVGLTIGLIGVAVGTFFLVKGNECS
NT seq 528 nt   +upstreamnt  +downstreamnt
atgatgatgatgaagctgctcctcttcctctgctccgtcctctgggtctctgctgatgtt
ctccatgaggagctctatatccttggctgttcagactctgatggagagttcatgctctct
ctggatggagaagagaagtggttcgctgactttaagaaggagaaaggagaagaacctcag
cctcctttcattgatcatatcagctacccggaaggattttatgaacaagctgtgaatgat
caacaggtctgcagattcaacatgaacctcggtcgtaaagctctgaagggcatccctctg
gagaaagattcagctttaagctttagccctcagctgggagacgtctacagctgctcagtg
gagcatcctgctctacaggaaccagtgactaagatgtttgatgtggacgtccatggtcct
cagcccagtgtgggacctgctgtgttctgtggagtcggtctgaccatcggactcattggc
gtcgccgtgggaaccttcttcctggtcaaagggaacgagtgcagctga

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