KEGG   Cyprinodon variegatus (sheepshead minnow): 107104507
Entry
107104507         CDS       T06110                                 
Name
(RefSeq) rano class II histocompatibility antigen, D-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145  Phagosome
cvg04514  Cell adhesion molecules
cvg04672  Intestinal immune network for IgA production
cvg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107104507
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107104507
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    107104507
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107104507
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvg04147]
    107104507
Exosome [BR:cvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107104507
  Exosomal proteins of epithelial cells
   107104507
  Exosomal proteins of breast milk
   107104507
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_2 Ig_2 I-set
Other DBs
NCBI-GeneID: 107104507
NCBI-ProteinID: XP_015259999
LinkDB
Position
Unknown
AA seq 181 aa
MDSSSLLCCCFLLFFTVPAADGFENYQVDLCEFTSPDLKDIEFSRSLVYNKKEFCRFSSS
LGKFVGYTEWGIYQANYFNNLTGYIQGLRADKERYCLNHVGIAYSAVLTKSAEPYVTIYS
ESPSGGQNAMLTCAAYSFYPKTIKVSWLRDGQEITSGVTSTEELPDGDWYYQIHSNLEYQ
P
NT seq 545 nt   +upstreamnt  +downstreamnt
atggattcttcatcactgctctgctgctgcttcctcctcttcttcaccgtccctgctgca
gatgggtttgagaattaccaggtggatctttgtgagttcacctcccctgatctgaaggac
atcgagttcagcagatccttggtttacaacaaaaaggagttctgcaggttcagcagcagt
ttggggaagtttgttggatacacggagtgggggatctaccaggccaactacttcaacaat
ctaactgggtatattcaagggctgagagctgataaggagagatactgcctgaaccacgtt
ggtattgcctactcggctgttctgactaaatcagcggagccctacgtcaccatttattct
gagtcaccctctggtggtcagaatgccatgctgacctgcgctgcctacagcttctaccct
aaaaccatcaaggtgagctggctgagagacggacaggagatcacctctggagtcacctcc
actgaggagctgccagatggagactggtactaccagatccactccaacctggagtaccag
cccag

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