Calliphora vicina (urban bluebottle blowfly): 135963943
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Entry
135963943 CDS
T10781
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135963943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135963943
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135963943
Complex C
U5 SnRNP specific factors
135963943
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
135963943
NCBI-ProteinID:
XP_065372029
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All DBs
Position
1:complement(139264007..139267626)
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AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDEDEEQSIYGQQDQQDEQDEEAMDDEEDHNEDEDKEVTAVV
LHEDKRYYPTAVEVYGPDVETIVQEEDAQALDKPLIEPVKKLKFQIKEQELPETSYNMEF
MADLMDTPPLIRNVALIGHLHHGKTTFVDCLVRQTHPQFEMNEERSLRYTDTLFTEQERG
VSIKATPVTLVLQDVKQKSYLMNIFDTPGHVNFSDEITAAMRMCDGVVVFVDAAEGVMLN
TERLLKHAVQEKMAITLCINKIDRLILELKLPPQDAYFKLKHIVEEVNSLLSTYGSAEDT
TLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVNYIEFSKRLWGDMYFHSKSRKFT
KKPPHNSAQRSFVEFILEPMYKVIAQVVGDVDTTLADTLAELNIRITKEEMKSNIRPLLR
LVCNRFLGDFSGFVNMCVEHIKSPLDNAKSKVDHIYTGPKESDMYRDMIECNQNGSLMVH
SSKMYPNDDCTFFQVLARVISGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVYEARY
KVELNRVPAGNWVLIEGIDQCIVKTSSIVDIKATDDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVSINWNKKRLGEF
FQVNYDWDLLAARSIWAFGPDNTGPNILVDDTLPSEVDKNLLTSVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDAVIANEALHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLLNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatttgtatgatgaatttggcaactatataggtcccgatttggacagtgat
gaagatgaggagcaaagtatttatggccagcaggatcaacaagatgaacaggatgaagag
gccatggacgatgaagaagatcataatgaagatgaagacaaagaagtcactgcagttgtt
ttacatgaggacaaacgttattatcccacagccgttgaagtttatggtcccgatgttgag
accatagtacaagaagaggatgcccaagctttggataaacccttaatagaaccagtcaag
aaattaaaatttcaaattaaagaacaggaattacccgaaacctcttacaacatggaattt
atggccgatcttatggacacacctccgcttatacgtaatgtggccttaattggtcatttg
catcatggcaaaaccacatttgtcgattgcctggtccgtcaaacacatccccaatttgaa
atgaacgaagaacgttcattgcgttacactgacaccttgtttacggaacaggaacgtggt
gttagcattaaggctaccccggttactttggtcctgcaggatgtcaagcagaaaagttat
ttaatgaatatttttgacacacccggccatgtaaacttttccgatgagattacggcggcc
atgcgtatgtgtgatggtgttgtggtatttgttgatgccgccgagggtgtcatgctaaat
acggagagactgttgaagcatgcagtgcaggagaaaatggccattacattatgtattaat
aagattgatcgcctaatcctagaattgaaattgccacctcaagacgcttatttcaaactc
aaacacattgttgaagaggtcaacagtttgctgagcacatatggcagtgcggaggatact
actttggtttcaccgatcttgggaaatgtttgctttgccagttctctttatggtttttgt
ttcacattgaaatcttttgccaaattatatgccgatacctatgaaggcgttaattatata
gagttttccaaacgactgtggggcgatatgtatttccacagtaaatcgcgcaaatttacc
aaaaaaccaccacacaattcggctcagcgtagtttcgttgaattcatattggaacccatg
tacaaggtgattgcccaggtggtaggtgatgttgatactaccttagccgacaccttggcg
gagttaaacatacgcattaccaaagaggaaatgaaatcgaatatacgtcctcttctgcgt
ttagtttgtaatcgctttttgggtgattttagtggttttgttaatatgtgcgtggaacat
ataaaatcgcctttggataatgctaaatcgaaagtagatcatatttacacgggaccaaag
gagagtgatatgtatcgtgatatgattgagtgcaatcagaatggttctctgatggtgcac
agttcgaaaatgtatcccaacgatgattgtacatttttccaggttttggctcgagttatt
tcaggaactttgcatgctggacaagaagttcgtgtgttgggtgaaaactataccctgcaa
gatgaagaagattcgcgtattttacaagtcggaagattgtgggtctatgaagctcgctat
aaagttgaattgaatcgtgttccagctggtaattgggttcttattgagggcatagatcag
tgtatagtcaaaacttccagtattgtggatatcaaggccactgatgatttgtatatcttt
agacctttgaagttcaacacacaaagtatcataaaaattgctgtggaacctgttaatccc
tcggagttgcccaaaatgttggatggtttgcgtaaagttaacaaatcctatcccttattg
tccacccgcgtagaagaatctggtgaacatgttattttgggcacaggagaactttatttg
gattgtgttatgcacgatttgcgtaaaatgtattcagaaatcgacattaaagtggcagat
cctgtggtggcattttgtgaaactgtggtggaaaccagttcgttgaaatgttttgctgaa
acacccaataagaaaaacaaaatcactatgattgctgagcctttggaaaagggtttggcg
gaagatatagaaaatgaagtggtgtcaataaattggaataagaaaaggttgggagaattc
ttccaggttaactatgattgggatttattggcagccagatctatatgggcttttggtcct
gacaataccggaccaaatattctggtggacgatacgctgccctcggaggtggataaaaat
ttgttaacctcggtgaaagattccatagtgcaaggttttcaatggggtaccagagaagga
cccttgtgtgaggagcccatacgcaatgttaaatttaaaattctagatgctgttatagcc
aatgaggctctacacaggggaggaggtcaagttatacccacagccagacgggtggcctat
tcagcgttccttatggccacaccacgactaatggaaccttatctatttgtggaagtacaa
gcaccagcagattgtgtgtcagctgtttacactgtcttggctagaagaagaggtcatgtc
acccaagatgctcctgtgtccggttcccccatctacaccatcaaagcttttatacccgcc
attgattcatttggtttcgaaaccgatttacgtacccatacacaaggtcaagcattctgc
ttgtccgtcttccatcattggcaaattgtacccggtgatcctttggataaatctattgtc
atacgtcctctagaacctcaacaagcttcgcatttggctagagaatttatgattaaaact
cgcagacgcaaaggtttgtcagaggatgtttccattaataagttcttcgatgatcccatg
ttgttggagttggcccgtcaagatgttttgcttaattatcctctataa
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