KEGG   Crassostrea virginica (eastern oyster): 111104545
Entry
111104545         CDS       T09197                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like isoform X1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn00052  Galactose metabolism
cvn00510  N-Glycan biosynthesis
cvn00513  Various types of N-glycan biosynthesis
cvn00514  Other types of O-glycan biosynthesis
cvn00515  Mannose type O-glycan biosynthesis
cvn00533  Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100  Metabolic pathways
Module
cvn_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    111104545
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    111104545
   00513 Various types of N-glycan biosynthesis
    111104545
   00515 Mannose type O-glycan biosynthesis
    111104545
   00514 Other types of O-glycan biosynthesis
    111104545
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    111104545
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    111104545
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cvn01003]
    111104545
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111104545
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111104545
Enzymes [BR:cvn01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     111104545
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     111104545
    2.4.1.90  N-acetyllactosamine synthase
     111104545
Glycosyltransferases [BR:cvn01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   111104545
Membrane trafficking [BR:cvn04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    111104545
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   111104545
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C CHGN Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 111104545
NCBI-ProteinID: XP_022294268
EnsemblRapid: LOC111104545
UniProt: A0A8B8AUB6
LinkDB
Position
7:9322032..9345901
AA seq 351 aa
MVEKHGQLKNEVFVTNKTSFYRLLTSPRFYIVFVLFQVFFIIFLIYRWDSEGYNQTLVVA
NQQMEEVLLNATTENCSLWNSSNPVKIPLCPIISPFLVGVKTPVVDLSIEWEDVFAKYDV
VRCNGHLKPSSCQARQKVALIVPFRDRYGHLKVFLNHIHPFLMRQQLDYKIYLIDLDDDI
LFNKGLLLNVGFLESGKEYDYDCYIFHDVDLLPENDHNLYRCSDQPRHMSVAVDKFNYKL
PYVSIFGGVSAMTKDQILFVNGFSNQFSGWGGEDDDMFNRLKFHNMTLMRSMDDVSTYKM
LKHKQSHPNPKRFKLIKTGMERVKQDGVKNLQYEILKRNEFPLYTYIKITI
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggttgaaaagcatggtcaactgaagaacgaagtatttgtgacgaacaaaacttcattt
taccgacttttgacatcacccaggttttatattgtatttgtgttgtttcaagtgtttttt
atcatttttttaatctatcggtgggattctgagggttataaccaaacgttagttgttgcc
aatcaacagatggaagaggttctgcttaatgccacaacagaaaactgctctctatggaat
tcctccaaccctgtgaaaattccattatgtccaattatctctcctttcttagttggggtc
aaaacgccagtagtagacttatccattgaatgggaagatgtgtttgccaaatacgatgtt
gttagatgtaatgggcatctcaagccttccagctgccaggctcgccaaaaagtggcgctg
attgttccctttcgggatagatatggtcatttaaaagttttcctcaaccacatccaccct
ttcttaatgagacaacagctagactataaaatatacctcatagatttggacgatgacatt
ttgtttaacaaaggtctcttattaaatgttgggttcctggagtcgggcaaagagtacgac
tatgattgttatatcttccatgatgttgatttgttgcctgagaatgatcacaacctgtac
agatgttctgaccaacctcgtcacatgtcagtagctgtggacaagtttaactacaaactt
ccatatgtttcaatctttggaggggtatcagcaatgaccaaggatcaaattttgtttgtc
aatggattttccaaccagttcagtggatggggtggggaagatgacgacatgtttaacagg
ttgaagtttcacaatatgactttaatgagaagtatggatgatgtctctacgtacaaaatg
ctgaaacacaaacagagccaccctaatccaaaacgattcaaattgatcaaaacagggatg
gagagagtgaaacaagacggtgtcaaaaacttacaatatgaaattttaaaaaggaatgaa
tttccattgtatacatatataaaaataacaatttga

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