KEGG   Crassostrea virginica (eastern oyster): 111108798
Entry
111108798         CDS       T09197                                 
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cvn03037]
    111108798
Cilium and associated proteins [BR:cvn03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   111108798
SSDB
Motif
Pfam: TPR_IFT122 Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_THOC3 Beta-prop_EML_2 Zn_ribbon_IFT122 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 ANAPC4_WD40 Beta-prop_WDR3_2nd Zn_ribbon_IFT122_C WD40_MABP1-WDR62_2nd WDR55 NBCH_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 TPR_IF140-IFT172 Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 TPR_GEMI5 TPR_IFT80_172 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_IFT140_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_RSE1_2nd TPR_7 eIF2A Clathrin WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_NWD2_C Beta-prop_SPT8 Zn_ribbon_5
Other DBs
NCBI-GeneID: 111108798
NCBI-ProteinID: XP_022300589
UniProt: A0A8B8BCT6
LinkDB
Position
8:64793143..64816644
AA seq 1193 aa
MRAVPIWVDKVHDRDKVDQCIWDLCFKPDGNQLIVAAGNRVLVYDTNDGTLIQSLKGHKD
TVYCVCYAKDGKRFASGSADKGVIIWTSKLEGILKYTHNDAIQCLAYNPVTHQLASCAVS
DFGLWSPEQKNVSKHKVNSRITCCSWTNDGQYLALGLYNGLVSIRNKGGEEKVKIERPNA
TTSPVWSLQWNPSREESYDVLAVADWGQXLSFYQLSGKQIGKDRNLGYDPNYVNWFSKGE
YVVVGGSNKQCCLHTKEGVKLGVIGDQTSWTWSAAVKPDSNYVAVGCQDGTIAYYQLIFS
TVHGLYKDRYAYRDNMTDVIIQHLITDQKVRIKCRDLVKKIAIYRHRLAVQLPDKIVIYE
LYSDDAADMHYKVKEKINKKFECNLLVVCSQNIILCQDKRLQCYSFQGIKEKEWVMESLI
RYIKVIGGPSGREGLLVGLKNGQIMKIFVDNAFPIMLLKQSTSVRCLDVSASRSKLAVVD
EHNTCLVYDINTKDLLFQEPNANSVAWNTHYEDMLCFSGNGLLNIKASNFPVHQQKLQGF
VVGFSGSKIFCLHIYSMSSVDVPQSASMYQYLEKKLFRDAYKVACLGVTDGDWEVLAHEA
LEGLDFDTAKKAFIRIKDLRYLELIHSIEERKKRGENDNMVFLGDIYSYQAKFGEAAKLY
KKSGTEQKAMNMYTDLRMFDQAKEYIGXGDPLDKKMLITKQADWAKSSNEPKAAAEMYIS
AGEFCKAIDIIGEHGWADMMIDLARKLDKADREXLSRAAMHLTKMEQYSFAAEVYSKMGD
IKALINLHVEAKHWEDAFTLAEKHTEYKEEVYVPYAQWLAENDKFDDAQEAFHKAGLQGE
AVKVLEQLTHNAVIESRFNDAGYYFWKLXMQCLDIAREEEEEDSEKREEMLAKFQDFQRK
ADMYYAYHSIQRYTDEPFTSITRGPVQHSRYLLHMIQGGIPHGISKVGTLYALAKQSKNL
GAHKLARYAYEKLQTLRIPSRFQEAVDVGSVMIRSKAFADSEELLPMCYRCSTTNPLLNN
GGNCCVNCRQPFVHSFVSFEVLPLVEFVIDSSLTDEEAVQILDLSIPKQKKEDRGWKEGR
IGHAQTLRLGQADEDDEPEEEDPFSAKLMTFDQEDTEFRPVVVTRPVLQTLSRSEVYILK
RPKPLRYQFFRSLLPDVTITQCPKCNKLFHTDDFELQYLQKGHCPFCRSTLDD
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgcgtgctgtaccaatctgggtggacaaagtacacgatagagacaaagttgaccaatgt
atttgggatctgtgctttaaacctgacggcaatcaactaatcgttgcggctggaaaccga
gtcttagtctatgacacaaatgatggaaccctcattcagtccttgaaaggccacaaggac
accgtgtactgtgtctgctatgccaaggacggcaagagattcgcctctggctccgctgac
aaaggagtaatcatctggacaagcaaattagaaggaattttgaaatatacacataatgat
gctatacagtgcttagcctataacccagttacccatcagctagccagctgtgctgtcagt
gactttggactgtggtctccagaacagaagaacgtgtccaaacacaaggtcaacagcaga
atcacctgttgtagctggaccaatgacggacaatacctggccctcgggctttataatgga
ctggtcagcattagaaacaaaggtggtgaagagaaagtgaaaatagagcgacccaatgct
accacatcacctgtgtggtctttgcagtggaacccatcaagggaagagtcatatgatgtc
ctagctgtggcagactggggtcaanagttatccttctatcagttgtcagggaaacagatt
ggaaaagaccgtaacctgggctacgaccctaactacgtgaactggttctccaagggagag
tatgtggtggtgggtggctccaacaagcagtgctgcctccacaccaaggagggggtcaag
ctaggggtcatcggggaccagacttcctggacctggtccgccgcggtcaaacccgactcc
aactacgtggcagtaggttgtcaggacggaaccattgcgtattaccagctgatcttcagc
acggtccatggattgtacaaggatagatacgcctaccgagacaacatgactgatgtcata
atccaacaccttatcactgaccagaaagtgagaattaagtgcagagatcttgtcaagaag
attgctatctatagacacagattggcagttcagctgccggataagatagtgatctacgag
ttgtactcggatgatgctgctgacatgcattacaaagtgaaggagaagatcaacaagaag
tttgagtgtaatcttctggtggtctgctcccagaacatcattctttgtcaggacaagaga
cttcagtgttactctttccaaggaatcaaggaaaaggaatgggtgatggaatccctgatt
cggtacataaaggtcatcgggggcccctctgggagagaggggctactggtgggcctgaaa
aatgggcagataatgaagatttttgtggacaatgcattccctatcatgctgttgaagcag
agtacctctgtgaggtgtctggacgtcagtgcctctcggtccaagctagcggtcgtagac
gaacacaacacctgtctggtgtacgatatcaacaccaaggatctactgttccaggagccc
aatgctaacagtgtggcctggaacacgcattatgaggacatgctctgtttctctggtaac
ggtctactgaacatcaaggccagtaactttccagtccatcaacaaaagttacagggcttt
gtggtgggcttcagtggatccaagatcttctgtctccacatctactccatgtcctctgta
gatgttccccagtccgcctccatgtatcagtacctggagaaaaaactgttcagggatgcc
tacaaggtggcctgtctgggggtaacagacggggactgggaggtactggcacatgaggcc
ctggagggactggactttgacacggccaagaaagcattcatccggatcaaggatctccgc
tatctggagctcattcactccatagaggagaggaagaaaagaggagagaatgacaacatg
gtgttcttgggagacatatacagttaccaagccaaatttggtgaggcggccaaactgtac
aaaaaatcaggaactgagcagaaggccatgaacatgtacacagatctcaggatgtttgat
caggccaaggagtacataggtntcggggaccccctggacaagaagatgttgatcaccaag
caggcggactgggccaagagcagcaacgaacccaaggcggctgccgaaatgtacatctca
gccggcgagttctgtaaggccatcgacatcatcggagagcacggatgggcagacatgatg
atagatctggcccgcaaactggacaaggctgatcgggagngcctgagtcgagcggccatg
cacctgactaagatggagcagtattcctttgctgccgaggtctacagcaagatgggagac
atcaaggccctcattaacttgcacgtggaggccaaacattgggaggatgctttcaccctg
gcagagaaacacactgagtacaaggaggaggtgtatgttccctacgctcagtggctggca
gagaacgacaagttcgacgatgcccaggaagcattccacaaggcaggacttcagggggag
gcagtgaaagtcttggaacagcttacccacaatgccgttatcgagagtcggttcaatgat
gctggctattacttctggaaactcntcatgcagtgcctggatattgccagagaggaagaa
gaggaagattcagaaaagcgagaggaaatgctggcaaagttccaggatttccagagaaag
gcagatatgtactatgcttatcactccattcagagatatacagatgagccatttacttcc
attaccagaggccctgttcaacattctcgatatcttcttcacatgatccagggaggaatt
ccccatggaatttccaaagttggcaccctgtatgccctcgccaagcagagtaagaacttg
ggagcacacaagctggcacgttacgcgtacgagaagctacagacactgaggattcccagc
cgtttccaagaagctgtggacgtgggaagtgtgatgatccggtccaaggcttttgcagac
tctgaggaactattaccaatgtgttatcgatgttctaccactaacccgctacttaacaac
ggaggaaactgctgcgtcaactgccgacaaccattcgttcattcctttgtctcctttgag
gtactccccctggtggagtttgtgatagacagcagtctgactgatgaggaggctgtacag
atcctggacctctccatccccaaacagaagaaggaggaccggggctggaaggaggggcgg
attggacatgctcagaccttgcgactgggtcaggctgacgaagatgatgaacctgaggag
gaagacccattctctgcaaaactcatgacttttgaccaagaggacacagaattccgacca
gtggttgtaactaggccagttctccagacattatctaggtcagaggtctacatcctcaag
agacccaaacctctgaggtaccaattcttcaggtccctactgccagatgtcaccataact
cagtgcccgaaatgtaataagctgttccacactgatgactttgagctacaatatctacaa
aagggacactgtcctttctgcagaagcactctagacgactga

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