Crassostrea virginica (eastern oyster): 111109690
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Entry
111109690 CDS
T09197
Name
(RefSeq) uncharacterized protein LOC111109690
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111109690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111109690
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
111109690
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111109690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
111109690
NCBI-ProteinID:
XP_022301616
EnsemblRapid:
LOC111109690
UniProt:
A0A8B8BEZ8
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Position
8:52122491..52129072
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AA seq
638 aa
AA seq
DB search
MNNADLFMMETPSFPQNSGHMPGGHMMYPPGFSLPDAGLIKQEPGESVVQKKKRGRKKKE
AEQEKITDHMPTKKKKRDRFNGMSEDEVMKRELPDHVQENLDILIVGINPGLCAAYVGHH
YAGPGNHFWKCLFLSGLIPEQLNAYDDYKLVKYGIGFTNIVARTTRGSADLTRKEIKEGA
TILCEKIKKYRPKIAVFNGKGIYEVFVGHKNFAFGKQPQPFAETETLVYVMPSSSARCSQ
LPRAIDKVPFYTALKKLRDYLRGDLEKLDDSEVCFPDVELKVVKKEPKQEKVEEDSKSNP
PLFGDQQAAMMAPAQMDHGNFPHHPNNPLPGNPNFIHVKQEPAFSPQDYGGQMPGCGQGG
NYPRPTTSPPQMFGGQFSQPGYPPQQMAGQGVMGLGKSPHGQAFQGNFQSEMYRQQGFQA
NQSFKQAMSISSQMNFSQGVQNFQMSGQYAMSMASSWAGQVQVKQEPHDWSSNIPTYSSP
ISQGNASQTQSGNPLQMLENLSQGLGASRTPPICTSSAYSLSQSPLTSNNNGIQGVHDNF
YGNQSYPQGNRLSQTPEHCGNSQLNHGNIPDEVPLPPSQSPIHIPDIIQDLPTTHGSVPP
VNQACTAPHPLGNMPPQLSMVKSEPKDFTTDTTCPFSK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgcagacctttttatgatggaaacaccatcctttcctcaaaattcaggccac
atgcctggaggtcacatgatgtaccccccagggtttagtctgccagatgccggactaatt
aagcaagaaccaggggagagtgttgtacagaagaagaagagaggacggaagaaaaaggag
gcggaacaagaaaagatcacagatcacatgcccacgaagaagaagaagcgtgaccgcttc
aatggaatgagcgaagacgaggtcatgaagagagaactgccggaccatgtacaagaaaac
ctggacatcctcattgtgggcattaatccaggactttgtgccgcctatgtagggcatcac
tatgctggacccggaaaccatttttggaagtgtttgttcttgtcgggtctaataccagaa
caactgaatgcctacgacgactacaaactggttaaatacggcataggattcaccaacatc
gtcgccaggacaaccagaggaagtgccgatctgaccaggaaagaaatcaaggaaggtgca
acaatattatgtgagaagatcaagaaatacagaccaaaaatagctgtttttaatggaaaa
ggtatttatgaagtatttgtgggtcacaagaattttgcctttggaaaacaaccgcaacca
tttgcagagacagaaacgttagtatacgtaatgccttcctcatcggcccgttgctcacag
ctaccccgggccatcgacaaagtcccattctacactgccctgaagaaactccgagactac
ctgcgtggagatctggagaagctggacgattcagaagtctgtttcccggacgtggaacta
aaggttgtgaagaaggaacccaagcaggagaaagttgaggaggactccaagtcgaatccc
ccactgtttggggatcagcaagctgccatgatggcccccgcacagatggaccatgggaac
ttccctcatcacccaaacaatcccctcccaggcaacccaaacttcatccatgtcaaacag
gagccggctttctcccctcaagactacgggggacagatgccggggtgtggtcagggaggg
aactatccccgccccaccacctcaccccctcagatgtttggtggtcagttctcgcagccc
ggttacccccctcagcagatggcagggcagggggtgatgggactgggaaagtcaccacat
gggcaggccttccaaggaaacttccagtccgagatgtacagacagcagggctttcaagcg
aatcagtcattcaaacaagctatgtcgatctcctcgcaaatgaactttagtcagggagtt
cagaatttccagatgagtggtcagtatgcaatgtccatggcctcgtcatgggctggacag
gtacaggtcaagcaggaaccacacgactggtcttccaacattcccacctacagttctcct
atctctcagggtaatgcttcgcagacacaatcgggtaatccactacaaatgctggaaaac
cttagtcagggacttggtgctagcagaacccctcccatctgtaccagctccgcatacagt
ttatctcaatctccactcacctctaacaataatggtattcaaggtgttcacgacaacttc
tatggcaatcaaagctatcctcagggaaacagactgtctcaaacaccagagcattgtggg
aattcacagctgaatcatgggaatattccggatgaagttcccctacccccgagccaaagt
ccaattcacattcctgacataatacaggacttgccaaccacccacggatctgtcccccca
gtcaatcaagcttgcactgcccctcaccccctaggtaacatgccccctcaactctccatg
gtcaaatctgagccaaaagacttcaccactgacacaacatgtccattttccaagtaa
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