Crassostrea virginica (eastern oyster): 111112401
Help
Entry
111112401 CDS
T09197
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111112401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111112401
04121 Ubiquitin system [BR:
cvn04121
]
111112401
Membrane trafficking [BR:
cvn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
111112401
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111112401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
NBCH_WD40
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_SPT8
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_like
WDR54
F-box_4
Beta-prop_HPS5
Beta-prop_RIG_2nd
Mcl1_mid
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
PQQ_2
Beta-prop_RIG_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
111112401
NCBI-ProteinID:
XP_022305586
UniProt:
A0A8B8BRL6
LinkDB
All DBs
Position
9:52361061..52369673
Genome browser
AA seq
444 aa
AA seq
DB search
MSADRDRKEGSLSSLPPEIVEKIFLYLDVADIARLSCVCVAWREIANVDHIWLHHCLERK
WMRFGLHDNILHEIPLSKPQSNVSNTSPYFQLYIPKETRLSPICRWKNVFIRVFHLFKNW
EKGRYTMPVTLKGHKDQVKAIDCNRTCIVSGSEDHTVIVWSLHTCSKLHTIKVHSDAVTS
VKLKDNMLVTGCGDSSVRVIDCTTGQLAFSLQGHQGSVDHLAIIEDYIVSAGTDKTVMVW
SISKQKHVHTLRGHVDEIECMAYCGYTVVTGSWDKAVMVWNVRQEDAVQMLHGHREVVTC
CYCTEDTVVSGSGDSDVRIWRIPSGECLHVLSAHEAEVYCLACSAEVIASGSSDSTIIIW
SYTGSLLHTLTGHLGVVRCLHINEFRLVSGGDQKKINVWDYRRGTLLNTIHRNPTRLHKM
LVTDTKLITASPETPGTVTVISFW
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagatagagatagaaaggaaggtagtttatcatcccttcctcccgagatagtg
gaaaaaatctttttgtatcttgatgttgctgacattgcaagactatcctgtgtctgtgta
gcatggagagaaatagcaaatgtggatcatatatggcttcatcactgtctggagagaaag
tggatgagatttggtcttcatgataacatcctccatgaaattcctctgagtaaaccacag
tccaacgtttccaacacatcaccttactttcagctctatattccaaaagagactcgcctt
tcaccaatatgtcgctggaagaatgttttcatcagagttttccatttattcaaaaattgg
gagaaaggacgatacacaatgccagtgacccttaagggacacaaagatcaggtcaaggcc
attgattgtaacagaacgtgtattgtaagtgggtcagaagaccacacagtgattgtatgg
agtttacacacttgctcaaaactacacaccatcaaggttcattcagatgctgttacatcg
gtcaaattgaaggacaacatgctggtgacggggtgtggagacagctcggtgcgagtcatc
gactgtaccacaggacagctggcattctccctgcaaggtcatcagggctcagtggatcat
ttagccatcatagaggactacattgtcagtgccggaacagacaagacagtgatggtatgg
tccatatctaagcagaaacatgtacacacattacgagggcatgtggatgaaattgagtgc
atggcctattgtggttacactgtggtgacgggatcctgggacaaagcagtgatggtgtgg
aacgtccggcaggaagacgcagtgcagatgcttcatggtcatagagaagtcgtgacatgc
tgttactgcacggaggataccgtggtgagtgggagcggagattctgatgtccgaatctgg
cggattccatccggagaatgcctgcatgtcttgtctgcccacgaggctgaggtctattgc
ttggcctgttcagcagaagtaattgcttcaggatcatcagatagcaccatcatcatttgg
agctacactggaagccttctacacacactgacagggcatctgggtgtggtcaggtgttta
catatcaacgagtttcggttagtgagtggaggggaccagaagaaaatcaatgtttgggac
tacaggaggggtacattgttaaacaccattcatcgaaatccaactaggctacacaagatg
ttggtcacggacaccaaactaatcacagcctcccccgagacccccgggacagtgaccgtg
ataagcttctggtga
DBGET
integrated database retrieval system
