KEGG   Crassostrea virginica (eastern oyster): 111118069
Entry
111118069         CDS       T09197                                 
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03008  Ribosome biogenesis in eukaryotes
cvn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111118069
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111118069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvn03041]
    111118069
   03009 Ribosome biogenesis [BR:cvn03009]
    111118069
Spliceosome [BR:cvn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111118069
Ribosome biogenesis [BR:cvn03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    111118069
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1
Other DBs
NCBI-GeneID: 111118069
NCBI-ProteinID: XP_022313071
UniProt: A0A8B8CEQ1
LinkDB
Position
2:50791960..50793835
AA seq 127 aa
MTDEVNPKAYPLADAQLTQEILDLVQQASHYKQLKKGANEATKTLNRGISEFIVMAADAE
PLEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRAVIACSVTVNEGSQLRPKIQTIQQ
NIEKLLI
NT seq 384 nt   +upstreamnt  +downstreamnt
atgaccgacgaagtgaatccaaaagcatatcctttggctgatgcccagctcactcaggaa
atactggaccttgttcaacaggcttcacactacaaacagttaaagaaaggagcaaatgaa
gcaactaaaactctcaacagaggaatatctgaatttattgtgatggcagctgatgcagaa
ccacttgaaattctgttgcatttaccactgttgtgtgaggacaagaatgttccttatgtg
ttcgtgagatcaaagcaagcactgggaagagcctgtggagtttccagggctgtcattgct
tgttccgtaacagtgaatgaaggatctcaactccgacccaagattcagaccattcagcaa
aacattgaaaaactcctcatctag

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