Crassostrea virginica (eastern oyster): 111118438
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Entry
111118438 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit beta-1-like
KO
K12401
AP-4 complex subunit beta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111118438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111118438
Membrane trafficking [BR:
cvn04131
]
Endosome - Golgi transport
Others
AP-4 complex
111118438
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT_GCN1
RTP1_C1
FANCF
Motif
Other DBs
NCBI-GeneID:
111118438
NCBI-ProteinID:
XP_022313627
UniProt:
A0A8B8CCY1
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All DBs
Position
2:complement(26746663..26748867)
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AA seq
537 aa
AA seq
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MAAQLESIAAQFDALSVHSTPDSSRAVLSQIMKLHXSGIDCGLLLPGMLKLLAHPDLATK
KAVYQMIALYAIQNPELSLLAVNTLMQECSDSNPLVRGLALKTLTSLNHESFVEYCLRGI
NMGLKDQSVYVRRVASCCCARVYQQNVDLNQDGQIVHQLYTMLRDSDPIVVVNSVMALEE
ILSKEGGIVINRNIANHLLNNLKDMTPWGQCYILNVLQKYKPKTQDDVFNMLNILDAFLV
SNNTAVATACLQLFLGLISSLPHLRPQVFKRYIENIVAALPQGNPELVFHILDHMNAYRD
EIKAELLQRYSXFFCKESDPHYLTKLKLNILPHLSSPTNIREILGEVFLHTSSSSQEISL
HALKAVMVLFKCDATISPMLIKKLKQLIDSDTPHVLSNIFQVLRSFDFNEIESGSEIIAK
IASKHKKLEDTNGRLAFLAVLSQYGNLLEESPYILEEYVENLPKEMDPVLRHQTLMTCVH
VFFHHPAAMQGILGQVLELCFQDSDKSVQCQALLYYRLLSNDVEHAKMIASTETQKL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaacttgaaagtattgctgctcagtttgacgctctctctgtccattccact
ccagactcatccagggcagtgttgtctcagataatgaaactacatnngagtggaattgat
tgtgggctcctcttaccggggatgctgaagcttttagcacaccctgatctagccacaaag
aaggcagtataccaaatgattgctttatatgccatccaaaatccagagctatccctgctt
gctgtaaacactctaatgcaggagtgttctgatagtaatccgcttgttagaggccttgcc
ttgaagaccctaacatccctcaatcatgaatcatttgtggagtattgcctgcgaggtatc
aacatgggtcttaaagaccaaagtgtgtatgtgcggagagtggcatcgtgttgctgtgca
cgtgtttaccagcaaaatgtggacttgaatcaggatggacaaattgttcatcagttatat
acaatgcttagggattcagatcccattgtggttgttaactctgtgatggctttagaggag
attttgagcaaggagggaggaattgtgattaataggaatattgccaaccacctactgaat
aacttgaaggacatgaccccatggggtcagtgctatatcctgaatgtcttacagaagtac
aaacccaagacccaagatgatgtgtttaacatgttgaacatcctggatgcctttctggtc
agcaacaacactgcagtggctactgcatgcttacaactgttcctcggtctcatttcatcc
ttacctcatctaagaccacaggtattcaagaggtacatagaaaatattgtagccgctctt
ccacaagggaatccagaacttgtgtttcatatcttggatcatatgaatgcttacagggat
gaaattaaggcagagttgcttcaacgttattctnatttcttctgcaaggaaagtgatccc
cattatttgacaaaacttaaattaaacattcttcctcacctgtcttcaccaactaatatc
agagaaattctcggagaagttttccttcatacatcaagctcatctcaagagatttcatta
catgctctgaaagcagtgatggtcctttttaaatgtgatgcaaccatatcaccaatgctt
atcaagaaactgaagcagcttatagactctgataccccacatgttttatccaatatattt
caagtattgagaagttttgactttaatgaaatagaaagtggttcagaaataattgccaaa
atagcttccaaacataagaagctggaggacacaaatgggcgcctagctttcctcgccgtt
ctgtcacaatatgggaacctgctagaggagagcccatatattctggaggaatacgtggaa
aatcttcccaaagaaatggatcctgtacttaggcaccagactctaatgacctgtgtgcac
gtgtttttccatcatccagctgccatgcaggggattctgggacaggttttggagctgtgt
ttccaggattctgataaatcagtccagtgtcaggcattgctgtactacagactcctcagt
aatgacgtagaacatgcaaaaatgatcgcgtccacagaaacacaaaaattatga
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