Crassostrea virginica (eastern oyster): 111119030
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Entry
111119030 CDS
T09197
Name
(RefSeq) guanine nucleotide exchange C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111119030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119030
Membrane trafficking [BR:
cvn04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
111119030
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
HI0933_like_1st
Motif
Other DBs
NCBI-GeneID:
111119030
NCBI-ProteinID:
XP_022314534
UniProt:
A0A8B8CFG7
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All DBs
Position
2:23931632..23938683
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AA seq
486 aa
AA seq
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MSSSKNIKQLIRNMSAGVIQIGSQEKVETMDSFIEEATPLSPSSKFSESNINIPGHNLIK
YMMLSHWDNILGPRVVHFWNMGTSEFDTSFLSRISSQSLSGEICREVTGFIDHKLYEISD
ADVFVTAFIFTAMGISGPCVHALSIVIQKSDMTFFLNIQHLFLKCFERIIRKFKVNLSQV
SVDFTFETTYTEFGELCHQCIENIGYLKKSMFPQKILLSSTYLCPAHHLDRDFLSCCISS
HLSTFGRSFVIGDKVDSVNMMVKTLSLFNSPKERCCSRLAQQNEPHPYHHDMWLQGQVQT
SDHLDLPVAEILYSQYPTTIIDLSQKMVRESPTYTEHVIHSQDQWYNELIGLQYEVTEPS
IPQGELFFLHDKSDTLVSGLLDELDKLPSDCGVREAYIQQFNRSIQYKALCIIKYVECET
NSGTIPFKGDLKKLQKDVCILSEGDFRIYLSAAEKLKPGLMGFIYSSKFSREHSNSGLST
NKPYVR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctccaagaatattaagcaactcattcggaacatgagtgctggtgtgattcag
ataggaagtcaggaaaaagtggaaacgatggactcatttattgaggaggcaactcctttg
agtccgtcctccaaattcagcgagtctaatattaatattcctggacataatttgattaaa
tacatgatgttgtctcactgggacaacatccttgggcctcgtgttgttcatttctggaac
atgggaaccagtgaatttgataccagtttcttgtcgcggatcagcagtcagagtttgagt
ggggagatatgtcgggaagtgacaggtttcattgaccacaagctctatgaaatatctgat
gctgatgtttttgtgacggcattcatatttacagccatgggcatcagtgggccatgtgtg
catgccttatcaattgtgatacaaaaatcagacatgactttcttcttgaatattcaacac
ctctttttaaagtgctttgaaagaattattcgaaaattcaaagttaatctcagtcaggtt
tcagttgatttcacctttgaaacaacctacacagaatttggcgaactttgtcatcaatgc
attgaaaatataggatatctgaagaagtctatgtttcctcagaaaattttgttgtcctct
acctacctgtgtcctgctcatcacctggacagggactttttaagttgttgcattagttca
cacttgtcaacatttggacgcagctttgttataggggacaaagtagacagtgttaatatg
atggtgaagactttgagtttatttaattcccccaaagaaaggtgctgttccaggcttgct
cagcagaacgagccccacccctaccaccatgacatgtggcttcaaggtcaagtccagact
tctgatcacctggatctacctgttgcggaaatcttgtacagccagtatcccaccactatc
attgatctgtctcagaaaatggtccgggaatcccccacctacacagaacatgtgattcat
tcccaagaccagtggtacaatgaacttattggacttcagtatgaagtaacagagcccagc
attccacaaggggaattgtttttcctacatgataaatcagacactctagtatcaggatta
cttgatgaactggacaagttgccctcggattgcggagtgcgagaggcgtacattcagcag
ttcaacagaagcatacaatacaaggctctgtgtatcattaaatatgtagaatgtgaaacg
aattctggaaccattccatttaaaggtgatttaaagaaacttcagaaagacgtgtgtatt
ctctctgaaggagacttccggatttatctatcagcagctgaaaaactgaagccaggatta
atggggtttatatattcctcaaaattttccagagaacattccaattctggtttgtcaaca
aataaaccttatgtacgctga
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