Crassostrea virginica (eastern oyster): 111119115
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Entry
111119115 CDS
T09197
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00900
Terpenoid backbone biosynthesis
cvn01100
Metabolic pathways
Module
cvn_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
111119115
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cvn01006
]
111119115
Enzymes [BR:
cvn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
111119115
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
111119115
2.5.1.29 geranylgeranyl diphosphate synthase
111119115
Prenyltransferases [BR:
cvn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
111119115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
FadR_C
Motif
Other DBs
NCBI-GeneID:
111119115
NCBI-ProteinID:
XP_022314677
UniProt:
A0A8B8CFV0
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All DBs
Position
2:52666547..52671794
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AA seq
299 aa
AA seq
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MSEKQDVDEKILLEPYNYICQIPGKKVRTKLAAAFNCWLQIPDEKLKLIGEVTQMLHNAS
LLIDDIEDNSNLRRGIPVAHNIYGVPQTINSANYVYFLGLEKVLQLNHPDCTKVFTARLL
ELHRGQGMDIYWRDAVVCPTEEEYKAMVIKKTGGLFGLAVGLMQLFSECKKDFSPLLNAL
GLYFQIRDDYANLYSVEYHDNKSYCEDLTEGKFSFPIIHAIRSSKDNNQVINILRQRTTD
NDVKKYCVECLHRQGSFEHTKDTLIQLENSIFELIEEHGGNPILTALINELKKVYRGPE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagatgttgatgaaaagatattactagagccctataactacatttgc
cagatacccgggaaaaaagtccgaaccaaattagcagcagccttcaactgttggctccag
atacctgacgagaagttgaaactaattggagaggtcacccaaatgctccacaatgccagt
ctattaatagatgatatagaagataattcgaatctgaggagaggaattcctgttgcccac
aatatatatggagtaccacagacaattaattcagcaaattatgtttacttcttgggttta
gaaaaagttctacagttaaaccatccagattgcacaaaagtattcacagctcggctcctg
gaacttcacaggggacaggggatggacatctactggagggacgcggtggtctgtcccact
gaggaggagtacaaggccatggtcataaaaaagactgggggactgttcggtttggctgtc
ggattgatgcaacttttcagtgaatgtaaaaaagatttttcccccttgttaaatgcattg
ggcttgtattttcaaataagagatgattatgctaatctgtattctgtagagtatcacgat
aacaaaagttactgtgaagatctgactgagggaaagttttcattccccataattcatgcc
atccgaagcagtaaggacaataatcaagtcataaacatcctgaggcagcgcaccactgac
aatgatgtcaagaaatactgtgttgaatgcctacatcggcagggctcttttgagcacacc
aaagacaccttaatccaactagaaaacagtatttttgagttgatagaggaacatggtggt
aatcctatactaactgcattaattaatgaattaaagaaagtatacagaggaccagagtga
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