Crassostrea virginica (eastern oyster): 111119763
Help
Entry
111119763 CDS
T09197
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like isoform X1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00052
Galactose metabolism
cvn00510
N-Glycan biosynthesis
cvn00513
Various types of N-glycan biosynthesis
cvn00514
Other types of O-glycan biosynthesis
cvn00515
Mannose type O-glycan biosynthesis
cvn00533
Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100
Metabolic pathways
Module
cvn_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
111119763
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111119763
00513 Various types of N-glycan biosynthesis
111119763
00515 Mannose type O-glycan biosynthesis
111119763
00514 Other types of O-glycan biosynthesis
111119763
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111119763
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111119763
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111119763
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119763
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111119763
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
111119763
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111119763
2.4.1.90 N-acetyllactosamine synthase
111119763
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111119763
Membrane trafficking [BR:
cvn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
111119763
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of breast milk
111119763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CHGN
Motif
Other DBs
NCBI-GeneID:
111119763
NCBI-ProteinID:
XP_022315936
EnsemblRapid:
LOC111119763
UniProt:
A0A8B8CNG8
LinkDB
All DBs
Position
2:complement(55728572..55749993)
Genome browser
AA seq
317 aa
AA seq
DB search
MQHSFKATLFFVVIIIQGFLFCAWIFIYRGSMYEQISRNDTSNVMTSLTTQRKRKCPLVS
PGLVGQLKIDKVSHSWETIEEKFSKIKDGHHCPENCKARQKVAIIIPFRDRENQLRVFLN
HMHPILMRQQLEYGIYVVEQSKGLEFNRGFLFNVGFKEALKDSDYECFILHDVDLLPEND
YNTYTCSTDHPKHLTAGIDKWNYKMLYTSYFGGVSGMTREQYEAINGFSNSFFGWGGEDD
DLYNRVIWSKMSVYRIINDVGKYTSLQHKQAAANSKRFEILKTGKERMWKNGLNTLKYNL
LQKTYKQLYIHLTVNVT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattcgtttaaagccacattgttcttcgtcgttatcatcatccaaggattcctt
ttttgtgcttggattttcatttacagaggcagtatgtatgaacaaatatctagaaatgat
acttcaaatgttatgacatcactgacaacacaaagaaaaagaaaatgtccacttgtatca
cctggattagtaggacaattaaaaatcgacaaagtttcgcattcttgggagaccattgaa
gaaaagttcagcaaaataaaagatggccatcattgtccggaaaactgtaaagcccggcag
aaagtggccataattattcctttccgtgacagagagaatcagctaagggtgttcttgaac
cacatgcatcctattcttatgagacaacaattggaatatggaatttacgttgtggagcag
agcaaaggtcttgaattcaaccgtggtttcttgttcaatgtcggattcaaagaagccctc
aaggactctgactatgaatgttttatactgcacgacgtggatctacttccagaaaatgac
tataatacttatacttgttctaccgaccatccaaaacatctcaccgctggcattgacaaa
tggaattacaaaatgttatatactagctattttggcggtgtctctggcatgacaagagaa
caatatgaagccatcaatggattttccaacagtttttttggatggggtggagaagatgat
gacttgtataacagggtgatatggagcaagatgtctgtatacagaatcataaacgatgtt
ggcaaatatacctcacttcaacacaaacaagcagcagcaaattcaaaaagatttgaaata
ttgaaaactgggaaagagcgcatgtggaagaatggattgaacaccctgaagtacaatcta
ttgcaaaagacttataaacaactctatattcatcttacagtaaatgtcacctaa
DBGET
integrated database retrieval system
