KEGG   Crassostrea virginica (eastern oyster): 111119792
Entry
111119792         CDS       T09197                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like isoform X1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn00052  Galactose metabolism
cvn00510  N-Glycan biosynthesis
cvn00513  Various types of N-glycan biosynthesis
cvn00514  Other types of O-glycan biosynthesis
cvn00515  Mannose type O-glycan biosynthesis
cvn00533  Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100  Metabolic pathways
Module
cvn_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    111119792
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    111119792
   00513 Various types of N-glycan biosynthesis
    111119792
   00515 Mannose type O-glycan biosynthesis
    111119792
   00514 Other types of O-glycan biosynthesis
    111119792
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    111119792
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    111119792
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cvn01003]
    111119792
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111119792
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111119792
Enzymes [BR:cvn01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     111119792
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     111119792
    2.4.1.90  N-acetyllactosamine synthase
     111119792
Glycosyltransferases [BR:cvn01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   111119792
Membrane trafficking [BR:cvn04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    111119792
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   111119792
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C CHGN
Other DBs
NCBI-GeneID: 111119792
NCBI-ProteinID: XP_022315992
EnsemblRapid: LOC111119792
UniProt: A0A8B8CJH7
LinkDB
Position
2:complement(58532002..58565007)
AA seq 320 aa
MQHSFKATLFFVVIIIQGFLFCAWIFIYRGSMYEQISRNDTSNVMTSLTTQRKRKCPLVS
PGLVGQLKIDKVSHSWETIEEKFSKIKDGHHCPENCKARQKVAIIIPFRDRENQLRVFLN
HMHPILMRQQLEYGIYVVEQSKGLEFNRGFLFNVGFKEALKDSDYECFILHDVDLLPEND
YNTYTCSTDHPKHLTAGIDKWNYKMLYTSYFGGVSGMTREQYEAINGFSNSFFGWGGEDD
DLYNRVIWSKMSVYRIINDAGKYTSLQHKQAVGNSKRFEVLKTGKERMWKDGLNTLKYNL
LQKTYKQLYIHLTVNVKDRS
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcaacattcgtttaaagccacattgttcttcgtcgttatcatcatccaaggattcctt
ttttgtgcttggattttcatttacagaggcagtatgtatgaacaaatatctagaaatgat
acttcaaatgttatgacatcactgacaacacaaagaaaaagaaaatgtccacttgtatca
cctggattagtaggacaattaaaaatcgacaaagtttcgcattcttgggagaccattgaa
gaaaagttcagcaaaataaaagatggccatcattgtccggaaaactgtaaagcccggcag
aaagtggccataattattcctttccgtgacagagagaatcagctaagggtgttcttgaac
cacatgcatcctattcttatgagacaacaattggaatatggaatttacgttgtggagcag
agcaaaggtcttgaatttaaccgtggtttcttgttcaatgtcggattcaaagaagccctc
aaggactctgactatgaatgttttatactgcacgacgtggatctacttccagaaaatgac
tataatacttatacttgttctaccgaccatccaaaacatctcaccgctggcattgacaaa
tggaattacaaaatgttatatactagctattttggcggtgtctctggcatgacaagagaa
caatatgaagccatcaatggattttccaacagtttttttggatggggtggagaagatgat
gacttgtataacagggtgatatggagcaagatgtctgtatacagaatcataaacgatgct
ggcaaatatacctcacttcaacacaaacaagcagtaggaaattcaaaaagatttgaagta
ttgaaaactgggaaagagcgcatgtggaaggatggattgaacaccctgaagtacaatcta
ttgcaaaagacttataaacaactctacattcatcttacagtaaatgtcaaagaccgatct
tga

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