Crassostrea virginica (eastern oyster): 111119793
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Entry
111119793 CDS
T09197
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like isoform X1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00052
Galactose metabolism
cvn00510
N-Glycan biosynthesis
cvn00513
Various types of N-glycan biosynthesis
cvn00514
Other types of O-glycan biosynthesis
cvn00515
Mannose type O-glycan biosynthesis
cvn00533
Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100
Metabolic pathways
Module
cvn_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
111119793
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111119793
00513 Various types of N-glycan biosynthesis
111119793
00515 Mannose type O-glycan biosynthesis
111119793
00514 Other types of O-glycan biosynthesis
111119793
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111119793
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111119793
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111119793
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119793
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111119793
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
111119793
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111119793
2.4.1.90 N-acetyllactosamine synthase
111119793
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111119793
Membrane trafficking [BR:
cvn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
111119793
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of breast milk
111119793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CHGN
Motif
Other DBs
NCBI-GeneID:
111119793
NCBI-ProteinID:
XP_022315995
EnsemblRapid:
LOC111119793
UniProt:
A0A8B8CNM5
LinkDB
All DBs
Position
2:complement(58582007..58608826)
Genome browser
AA seq
317 aa
AA seq
DB search
MQHSFKATLFFVVIIIQGFLFCAWIFIYRGSMYEQISRNDTSNVMKSLTTQRKRKCPLVS
PGLVGQLKIDKVTHSWETIEKKFSKIKDGHHCPENCKARQKVAIIIPFRDRENQLRVFLN
HMHPILMRQQLEYGIYVVEQSKGLEFNRGFLFNVGFKEALKDSDYECFILHDVDLLPEND
YNTYTCSTDHPKHLTAGIDKWNYKMLYTSYFGGVSGMTREQYEAINGFSNSFFGWGGEDD
DLYNRVIWSKMSVYRIINDAGKYTSLQHKQAVGNSKRFEVLKTGKERMWKDGLNTLKYNL
LQKTYKQLYIHLTVNVT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattcgtttaaagccacattgttcttcgtcgttatcatcatccaaggattcctt
ttttgtgcttggattttcatttacagaggcagtatgtatgaacaaatatctagaaatgat
acttcaaatgttatgaaatcactgacaacacaaagaaaaagaaaatgtccacttgtatca
cctggattagtaggacaattaaaaatcgacaaagttacgcattcttgggagaccattgaa
aaaaagttcagcaaaataaaagatggccatcattgtccggaaaactgtaaagcccggcag
aaagtggccataattattcctttccgtgacagagagaatcagctaagggtgttcttgaac
cacatgcatcctattcttatgagacaacaattggaatatggaatttacgttgtggagcag
agcaaaggtcttgaattcaaccgtggtttcttgttcaatgtcggattcaaagaagccctc
aaggactctgactatgaatgttttatactgcacgacgtggatctacttccagaaaatgac
tataatacttatacttgttctaccgaccatccaaaacatctcaccgctggcattgacaaa
tggaattacaaaatgttatatactagctattttggcggtgtctctggcatgacaagagaa
caatatgaagccatcaatggattttccaacagtttttttggatggggtggagaagatgat
gacttgtataacagggtgatatggagcaagatgtctgtatacagaatcataaacgatgct
ggcaaatatacctcacttcaacacaaacaagcagtaggaaattcaaaaagatttgaagta
ttgaaaactgggaaagagcgcatgtggaaggatggattgaacaccctgaagtacaatcta
ttgcaaaagacttataaacaactctacattcatcttacagtaaatgtcacttga
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