Crassostrea virginica (eastern oyster): 111120639
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Entry
111120639 CDS
T09197
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111120639
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
111120639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3677
Adaptin_N
API5
Cnd1
FANCL_d1
Motif
Other DBs
NCBI-GeneID:
111120639
NCBI-ProteinID:
XP_022317209
EnsemblRapid:
LOC111120639
UniProt:
A0A8B8CPU8
LinkDB
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Position
2:35427092..35454231
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AA seq
2082 aa
AA seq
DB search
MSSKRPLKAHIAPPGDFIALGKHSKPGSSDGDSTKVPTPKKLGVPSGKREASGASGLAKK
PKLMGQTFTPLGRSDVERRSSPAPTPASLSQYEELAIDVDPQELLEEILDAEDSCNDERL
EGLFCGAIKYLHGNRSKPDPAVYLTLMYLSKTSSSIFNSDVIIQAFCSLLKRDLSLNFKS
KGNSLVSVCACSILMAAFSKEENWPDDFVKVFVEDSLGERVWVDRADCKAFVDNIITAFN
TNLPAKSAMAVEQTSAKEQSGTASPVVGFLQDEDDKDSEVKISALVEMEAVPVSARYPYQ
QESIEMMIMEVIREQLNKRQPMDATSKNLIRFMTATCGYGEVRLLASQRLEMWLQNPKLA
RPAQDLLMSICMNCSQHDQKDLETMAILIKIRMKTKPLLNHFLNCLRELLEQHPENIRMI
LTHTIYNELSNTKNPNNMAIITTLFQKSGEQSARILAEVFQDLLANKDDYLRAVRGLFRE
IVRSLKHDINLTSFCLGLMQERVEAKFNDLDHNLRERYVMSIGDLVTLAIFLCITPQVRE
AAAALARGEKKDLGTLHSFRQQAGLIQRDSVWWLHTIVPKIIEVKLSEYVHCLHKVLFME
SADQYYNKDNWPLEADRSTFLHLATNVPVLEDTLMRVLVIGLSRELPLGQVDAVELADQL
VKRAASLCLDGQIVLQMEKLELVDALLNLCSYRHPTDITLPKGYKPPTLAISNLYWKSWV
ILLILAAFNPGTFGLTGWKNYPTLKCLMEQVMTGNYSFPPPTMADEEQTVDDIRNKEKQF
AQQERQQILEFESHLAAATSKVTITEANSLLISQLTTMDPNGIARNPPPAITEQLKLLND
NLRIGQMLCRSRQPDFLLDIIQRQGSSQSMSWLAELVESSEGSLEVLPVQCLCEFLLHDE
DTPTLEEDPKLGKHKQKQKLRKREQLLHRLQGLVWGESDMTPQVLDYFLKRLSSNQASNR
ALAIRGLSMVIAKEESMETDSSIPHKWLCKDLPLIPMFPKIYPQITESLRQACQIETDPD
LVSAYIMFLSQQTEDKNLHDLDDIALDIANLIVDRTTVVNHILPQEEGRENELAHLTLTA
LYSLYFNYLTKAKKPNKEAYSWSNTQDQILLQWEGGDSATMHVLVVHAMIILLTYGPPNG
ESDYQELLDTWFPESGQPPSAFLLDTSEEALLLPDWLKLRMIRSRVHQLVDVALQDIEPA
QLLLFVQSFGIPVASMSRLFRCLDNAVTEDSNMIEEAVEDKAYMAQLIEIQHMRGVLGGD
IFYKLLTKALPPKPEAPDEEMKETESVDEKWAQKGESSKTASVHNVTDLIMQIFNKEESK
SKDIQQQYHRLLMALSRSETSTTIEVTQVLLEMLGGRHGSQFAQVFSANPQSCSLLKLLV
SKKATLGGLLYKLMETLFNEIKGQRCMVTSIVNQYLLSNKPNVPDRRPSYKSMKSVGTSS
QEVLDDLINQVQKDENNMEKMIKECMKEHTKPDHSLTAKQSSHQTLTAVGCKAILRDDQQ
PGNTMTTSMALLFVDWLELLDPDLVAMVPDLQQQLLFARERLQGVVRQSVGHSSQPYLLT
LLTHQSSWATLQRCINCLLQPSQVPRFSPNAVLDFLWACLQIPKIWRGRERRTPKNYTPE
NVLGLTPEHLIALIKYTVEEAILLCPESEAGDKRVAMERQNCIANRVDLLMSCLAENHSH
LQAVVSFIRSIPPSSTDKMLYQQLLVELYSQCPKVISWLSDVQGSFFDGQLSQSTITQVD
IVSHRLLTCLGQAGNGKTAEDKMYDANIACRKLASQHPILMLRQLPLIAALLKGKTQFTF
GEMRHKNYLLLFTHVLGLMETLQPHIYRRDYPALADIIDSYFLLIGTHGRGKQLGPIIHK
YIKFLYQYTVNEPQQSSVILQKYVNLLSGISTMYPELTVLKSLLAGLTLSRQADSNQGSV
APAVAPPRSTSPWTVGQLTPFLDRLRESTDSEDILEVLTDLDETSKRKVDILEHFIGDLK
KFLMHGSDTVRNTAYSLVMRYIRHNPRASEQFVGCFLHCFDSVNPDIVTSALKNLPEFCV
LCQDHADEILQKSFMVGTTTSIETSSYISETLQLLNLETVQI
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaagcgtcctttaaaagctcacatcgctcccccaggggacttcattgcgcta
ggcaaacacagtaagcctgggagttcagatggggattctacaaaagttccaacgcccaaa
aaactgggtgtaccctcgggaaagagagaagcatcaggagcgtcaggcctggcaaagaaa
cccaaacttatgggacagacatttacaccgctaggcagaagtgatgttgagaggagaagt
tcacctgcccctactcctgcctccctgtcacaatacgaagaactggcaattgatgttgac
ccacaagaattactggaggaaattttagatgctgaggattcttgcaatgatgaaagactg
gaagggttgttttgtggggctatcaaatatctccatgggaaccgatccaaaccagaccct
gctgtctatcttacactcatgtatctgtccaaaacaagctcctccatcttcaacagtgat
gtcattattcaggcattctgtagtctcttgaagagggatctgtcattgaattttaaatct
aaagggaacagtctggtgtctgtgtgtgcctgcagcattctgatggctgccttctccaag
gaagagaactggccggatgattttgtcaaggtatttgtggaggattccttgggggagagg
gtttgggtagacagggcagactgtaaggcctttgtggacaatatcatcaccgccttcaac
accaacttaccggccaaatccgccatggctgtagagcagacgtcagctaaagagcagtct
ggaacagctagccctgtggtagggtttctccaagatgaggatgacaaggactccgaggtg
aagatttccgccttggtggaaatggaggctgttcctgtcagtgcaagatatccctatcaa
caagagtcaattgagatgatgataatggaggtcattagagagcaactgaacaagagacag
ccaatggatgccacctccaagaatctgatccgcttcatgacggccacctgtgggtatggg
gaagtgaggctactggcatcacagcgattggaaatgtggctgcaaaatccaaaactcgcc
agaccagctcaggatcttctgatgtcaatctgtatgaactgtagtcagcatgatcagaaa
gacctagaaaccatggccattctcatcaagatccggatgaaaacgaaaccactcctcaac
catttcctgaattgcctgagagagttgctggagcagcacccagaaaatattcgcatgatt
ctgactcacaccatttacaatgagttgtctaacaccaaaaaccccaacaacatggccata
atcaccacactgtttcaaaagagtggagaacagtcagccaggatccttgctgaggtgttc
caagacttgctggccaacaaggatgactatctgcgggctgtgaggggtctgttccgggaa
attgtgaggtcactgaagcatgacatcaacctcacctccttctgtctggggctgatgcag
gagagggtggaggccaagttcaatgacctagatcacaatctaagggagcggtacgtgatg
tctataggagatcttgttacattggccatatttctgtgtattacaccccaagtcagagag
gcagcagctgctttagcaaggggagagaagaaagatctgggcacgctgcacagcttccgg
caacaggcggggctgatacagagggactcagtgtggtggctccacaccattgtccccaaa
atcatcgaggtcaagctctccgagtatgtccattgcctccacaaagtcctgttcatggag
agtgctgaccagtactacaacaaggacaactggccactggaggctgaccgaagtacattt
ctgcacctggctacaaacgttccagtcttggaggacactttgatgagggtcctggttatt
gggctgtcccgggagctaccgcttggccaggtggacgctgtggagctggctgaccagctg
gtgaagagagcggccagcctctgtctggatggtcagatcgtgttacagatggagaaactg
gagctggtggatgcccttctcaacctgtgtagctacagacacccgacagacatcactctg
ccaaagggatacaagccacctacattggcaatctcaaatctgtattggaaatcatgggtg
atattgcttatattggcagccttcaatcccggaacatttggtctaactggctggaagaat
tacccaacactgaaatgcttgatggaacaagtcatgacagggaattattcctttccaccg
cccacgatggctgatgaggagcagaccgtggatgacatccgtaataaagagaaacagttt
gcccagcaagaaagacaacagattctggagtttgagagccatcttgctgcagccaccagt
aaagtaaccatcacagaggccaacagtctgttgatctcccagctcaccaccatggaccct
aatggcattgctcgtaacccgccaccagcgatcacagagcagttgaaacttctaaatgac
aacctgaggattggacagatgttgtgtagaagtcgacagcctgacttcttactggacatc
atacaacgacaggggagttcccagtccatgtcgtggctggctgagctggtggagtccagc
gagggatccctggaggtcctccctgtccagtgtctgtgtgagttcctcctccatgacgag
gacacgccaacgctagaggaggatcccaaactgggcaaacacaaacaaaaacagaagctg
aggaagagggagcagctgctgcatcggctgcagggcctggtttggggggagagtgacatg
accccccaggtcctggactacttcctcaaaagactctcctccaaccaggcctccaacagg
gcacttgccatcaggggtttatcaatggttatagcaaaagaggaaagcatggaaactgac
agcagcatcccccacaaatggctgtgcaaggacctgccgctcatccccatgtttcccaag
atttatccccagataacagaatctctcagacaggcctgtcaaatcgagactgaccctgac
cttgtgagtgcttacatcatgttcctatcacaacaaactgaggacaagaatcttcatgac
ctggacgacattgctctggacatagccaatctgatagtggacagaacaactgttgtgaac
cacattctgccacaggaggaggggcgggagaacgagttggctcacctgactctgactgcc
ctgtactcactgtacttcaactatctgaccaaggccaagaaacccaacaaggaggcttac
tcttggtccaatacccaggaccagatcctgcttcagtgggagggaggggactcggccacc
atgcatgtgctggtggtccacgctatgatcattctgctcacctatggaccgcctaatggt
gagagtgactatcaggaactactggatacctggttcccggaatctggccaacccccgtct
gctttcctacttgacacttcagaggaggctcttctgcttcctgattggttgaaacttaga
atgatcaggtcaagagttcatcagctggttgatgtggcattacaagacatagaaccagcc
cagcttctgctgtttgtccaatcctttgggattcctgtggccagtatgagtcggctgttt
cgttgccttgacaacgcagtcaccgaggactccaacatgatcgaagaagcagtggaggac
aaggcttacatggcccagctgatcgagatccagcacatgaggggggtcctcggaggggac
atcttctataagctcctaaccaaagccctgcccccgaaacctgaggctcctgatgaagaa
atgaaagagacagagagtgtcgacgagaaatgggctcagaaaggggaaagttcaaaaact
gcatcagttcataatgttacagatttaattatgcagattttcaataaagaagaaagcaag
agtaaagacatacaacaacagtaccacagactgttgatggccttatcccgatcggaaacc
tccaccaccattgaagtcacacaggtgcttcttgagatgctgggaggtcgacatgggtct
cagtttgcccaggtgttctcagcgaatcctcagagctgctcactgctaaagctcctggtg
tccaaaaaggccactttaggaggtcttttatacaaactaatggagacattgtttaatgag
atcaaaggacagagatgtatggtgacctccattgtcaaccagtaccttctgtccaacaag
cccaacgttccggaccgacgtccttcctacaagtccatgaaatccgtgggaacctctagt
caggaagtgttggatgatttaatcaaccaagttcagaaggatgagaacaacatggagaag
atgattaaggaatgcatgaaggagcacacaaagcccgaccacagcctgacggccaagcag
agctcccaccaaacgctgacggcggtcggctgtaaggccatcctcagggacgaccagcag
ccaggtaacactatgactacatccatggctttgctgtttgtggattggctggagttacta
gatcccgatctggttgccatggtgcctgacctacagcagcagcttctgttcgcgcgtgag
cgtctacagggcgtggtcagacagagcgtgggtcacagcagccagccttacctcctgacc
ctcctgacccaccagagcagctgggccaccctccagaggtgtatcaactgtctcctgcaa
cccagccaggtgcccaggtttagtccaaatgcagtgctagatttcctttgggcttgtctg
cagattcctaagatatggagagggagagaacgaagaacaccaaagaactacaccccagag
aatgtccttggattgacccctgaacatctgatagcattgatcaaatacacggtggaggag
gccattttgttgtgtcctgagagtgaggctggagataagagggttgccatggagaggcag
aactgtatcgccaatcgagtggatctcctcatgtcatgcctggccgagaatcacagccat
ctgcaggctgttgtcagcttcatcaggagtataccgccatccagcacggacaagatgctc
taccaacaactgctagttgagttgtactcgcagtgtcccaaggttatctcttggctctca
gacgtacagggctcattttttgatggtcagctttctcagtccacaattacacaggtggac
attgtttctcatcgactactgacctgcttaggacaagctggaaacggtaaaactgccgag
gacaaaatgtacgatgccaacatcgcctgccgcaaactagcctcccaacatcccatcctc
atgctcagacaactacctctgattgcggccttactaaagggaaagactcagttcacgttt
ggagagatgcgacacaagaactaccttctcctcttcacccacgtcctggggctgatggag
accctacagccccatatctacaggagggactaccccgccctggctgacatcatcgactcc
tacttcttactcattgggactcatggtcgagggaaacaactgggtccaatcatccataaa
tacatcaagttcctgtatcagtacactgttaatgagccacagcagtcctcagtcatcctg
cagaaatatgtcaacttactcagtggcatctcaaccatgtaccctgaactgacagtgctt
aaatccttgctggctggactaactctctcccgtcaggcggacagtaaccagggcagcgta
gccccagctgtggccccgcccaggtccacctccccctggaccgttggtcagctgacccca
tttctggacaggctgcgcgagtccactgacagtgaagatatattggaagtgctgactgat
cttgatgaaacttcaaagaggaaggtggacatactggaacatttcattggagatctgaag
aagttcctgatgcatggctcggatacagtgaggaatacagcgtacagtctggtcatgaga
tacatcaggcacaaccctcgagcctcagaacaatttgtgggctgcttccttcattgcttt
gatagtgtgaacccagatattgtcacaagtgcattaaaaaatttaccggagttttgtgta
ctttgtcaagatcatgctgatgaaattctgcaaaagtcttttatggtgggaacaactact
tccatagaaacgagcagttacatcagcgagaccttgcagctgttgaacctagaaactgta
cagatctag
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integrated database retrieval system
