Crassostrea virginica (eastern oyster): 111125440
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Entry
111125440 CDS
T09197
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00510
N-Glycan biosynthesis
cvn00513
Various types of N-glycan biosynthesis
cvn00514
Other types of O-glycan biosynthesis
cvn00515
Mannose type O-glycan biosynthesis
cvn00533
Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100
Metabolic pathways
Module
cvn_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111125440
00513 Various types of N-glycan biosynthesis
111125440
00515 Mannose type O-glycan biosynthesis
111125440
00514 Other types of O-glycan biosynthesis
111125440
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111125440
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111125440
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111125440
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111125440
2.4.1.90 N-acetyllactosamine synthase
111125440
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111125440
Glycolipid
111125440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
111125440
NCBI-ProteinID:
XP_022324954
UniProt:
A0A8B8DBL3
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All DBs
Position
3:16099892..16107126
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AA seq
357 aa
AA seq
DB search
MITISRRYAVSFLALGKRSLPMAIMIIYIGFVTFALFNYRMHCIFTEPTTLIKYHLLEKE
EANKLCKIPWDNLGVEDVDIFHEHDLMTIQHQNPLVLKGGEGKPEGCTSYQKVAIIVPYR
NRYFHMKLLLSRLHPLLRKQKIHYRIFVIEQATNDSFNRGKLMNVGFKEALKEDHYDCFI
FHDVDMIPENNKNLYLCDDHARHLSSAIDEMRYHVMYYNYAGGVIAMKRDVFKVINGYAN
SYWGWGNEDDDLSARIQEAGYLLTRPPEHIGRYKMVRHKKESRAENGYERFLGWRGRWLQ
DGLHSPKTMTYNVLSKSVEPLYTNITVDLLYDKNKEINVAEDTTKESLWWFLKFYFP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattaccatatccagaagatatgcagtgtcctttctggcacttggcaaaaggagtttg
cctatggccataatgattatttatataggctttgttacctttgcattatttaattatcga
atgcattgtattttcactgaaccaacaacattgataaaatatcatttacttgaaaaagaa
gaagctaataaactttgtaaaattccatgggacaatttaggtgtggaagatgttgacatt
tttcatgaacatgatttaatgaccatacaacatcagaaccccctggtactgaagggaggg
gaggggaaacctgagggctgtacttcttaccagaaggtggccatcattgtcccctacaga
aaccgatattttcatatgaagttgttactctctcgacttcatcctttgctccgaaagcag
aaaattcattatcgaatatttgtcatagaacaggctacaaatgacagcttcaacagaggg
aagctgatgaatgtaggatttaaagaagccctaaaggaggaccactatgactgtttcatt
ttccatgatgtcgacatgatcccagaaaacaataaaaatttgtatctctgtgatgatcat
gcccgacatttatcatcggctattgatgagatgcgctatcatgtaatgtattataattat
gctggtggagtaatagcaatgaagagagatgtgttcaaagtaataaatggttacgctaat
tcctactggggatggggaaatgaagatgatgatctctctgcaagaatacaagaagcaggg
tacttactaacacgaccacctgaacacattggaagatacaaaatggtccgacacaaaaaa
gagtccagagctgaaaatggatatgagcgcttcttgggctggaggggtagatggttacaa
gatggtttacacagtcccaaaacaatgacctacaatgtcctcagcaagtctgtggaaccg
ctttacaccaatatcactgtggatcttctgtatgataagaacaaggaaatcaacgtagct
gaagataccacgaaagaatccctttggtggtttttgaaattttactttccatga
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