Crassostrea virginica (eastern oyster): 111125973
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Entry
111125973 CDS
T09197
Name
(RefSeq) actin, adductor muscle
KO
K05692
actin beta/gamma 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
cvn04145
Phagosome
cvn04814
Motor proteins
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111125973
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111125973
09142 Cell motility
04814 Motor proteins
111125973
04820 Cytoskeleton in muscle cells
111125973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111125973
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111125973
03036 Chromosome and associated proteins [BR:
cvn03036
]
111125973
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111125973
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111125973
04147 Exosome [BR:
cvn04147
]
111125973
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111125973
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
111125973
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111125973
NuA4 complex
111125973
Chromatin remodeling factors
BAF complex
111125973
PBAF complex
111125973
GBAF(ncBAF) complex
111125973
SWR1 complex
111125973
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
111125973
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
111125973
Exosome [BR:
cvn04147
]
Exosomal proteins
Proteins found in most exosomes
111125973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
111125973
NCBI-ProteinID:
XP_022325998
EnsemblRapid:
LOC111125973
UniProt:
A0A8B8DDC3
LinkDB
All DBs
Position
3:complement(52454371..52456915)
Genome browser
AA seq
376 aa
AA seq
DB search
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgaagttgcagctttagttgtggacaatggatccggaatgtgcaaggcc
ggtttcgccggagacgatgccccacgagctgtattcccttccattgtcggaagaccaaga
catcagggcgtcatggttggtatgggtcagaaagacagctatgttggagatgaagcccag
agcaagagaggtatcctcaccctgaagtaccccattgaacacggtatcgtcacaaactgg
gatgacatggagaagatctggcaccacactttctacaacgagctccgtgtcgcacctgaa
gagcaccccgttctgcttactgaggcccccctcaaccccaaggccaacagagaaaagatg
acacagatcatgttcgagaccttcaacgctcccgccatgtacgtcgccatccaggccgtg
ctgtccctgtacgcttccggtcgtaccaccggtatcgtcctggactccggtgatggtgtc
acccacactgtccccatctacgaaggttacgctctgccccacgccatcctccgtctggac
ttggctggtcgtgatcttactgactacctcatgaagatcctcaccgagcgtggttactca
ttcaccaccacagccgagagagaaatcgtcagagacatcaaggagaagctctgctatgtc
gccctcgacttcgagcaggaaatggccaccgccgcttcctcctcctccctggagaagagc
tacgagcttcccgacggtcaggtcatcaccatcggtaacgagagattccgttgccccgag
tctctgttccagccatccttcttgggtatggaatctgctggtatccatgaaaccacttac
aattccatcatgaagtgcgacgtcgacatccgtaaggatctgtacgccaacactgtcctc
tccggaggtaccaccatgttccctggtattgctgaccgtatgcagaaggaaatcactgct
ctggctcccagcaccatgaagatcaagatcattgctccacccgagaggaaatactccgtc
tggatcggtggttccatcttggcctctctgtccaccttccagcagatgtggatcagcaag
caggagtacgacgagtccggcccatccatcgtccacaggaaatgcttctaa
DBGET
integrated database retrieval system