Crassostrea virginica (eastern oyster): 111128592
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Entry
111128592 CDS
T09197
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111128592
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
TMF_TATA_bd
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
111128592
NCBI-ProteinID:
XP_022330015
UniProt:
A0A8B8DSQ0
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Position
4:complement(35331445..35355485)
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AA seq
565 aa
AA seq
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MAERTLSPPPSLSSVPKSPPPPIQQTPEGNPVFVNFDDKYRCVVCKGVAREAVQTRCGHR
GCEECFSNLLKGDPTDVKCPAEEESCCVLQAKEIFRDFGARREIRLLRVFCTYKTKGCKD
VVRWKDLQEHESECCYRPSKCRFSQVGCPEITIQKEVSDHEKNCPFRLEVCRYCFEEIQH
QLIKDHLDNTCPNYEIPCLYQCGVNPAQRRQMVEHFNKECPNRPIKCKYHSIGCEFTGSE
AEVDQHTKSACDRHVELSVVRATEASLDGLHAREKSRELDGKFAELQQLMKRNVQLMEET
KDGVEALKNTIKDVRLKVVAQTERLITVERKVSGVADKETQDKMSRELMLVKEQQTSVEN
RVTQLERIGPMGGQNDQSADMVTHHDRQLGIMDLRLAELDLRFQVMETASYNGVLMWKIR
DYSRRKLDAKLGKTISLYSQPFYTGRFGYKMCARVYLNGDGVGKGSHLSLFFVIQRGEYD
ALLPWPFRQKVTLMLLDQDSGSRHLVDSFRPDITSSSFKRPTTDMNVASGCPLFVSHGVL
ETPTFLQDDTIFLKVVVDLEGLRQH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgcactcttagtccgcccccatctctctcttccgtgccaaaatcaccacca
ccacccatccaacaaactcccgagggaaacccagtcttcgtgaattttgatgacaaatac
agatgtgttgtgtgcaagggcgtggctagagaggcggtgcagacgcgctgcggacataga
ggatgcgaggagtgcttctccaatttgctaaaaggagacccgactgacgtaaaatgtcca
gcggaggaggaatcatgttgtgtgttacaggcaaaagagattttcagagactttggtgcc
cggagagaaataagactccttcgtgtgttttgtacatacaagacaaagggatgtaaagat
gtagtgaggtggaaggatctacaggaacatgaatcggagtgctgctacagaccatcgaaa
tgtagattctctcaggttggatgccccgagattacaattcaaaaagaagtatctgatcac
gagaagaattgtccatttcgattggaagtctgtaggtactgtttcgaagagatccagcac
caattaataaaggatcatctggataatacatgtccaaattatgaaattccgtgtctatat
cagtgcggagtgaatccagcacaaagacgccagatggtggaacattttaacaaggagtgt
ccaaaccgaccaatcaagtgtaaataccacagcattggatgtgaatttacagggtcggaa
gcggaagttgaccaacatacaaagtcggcatgtgatcgtcatgtagaactctcggtagtg
cgggcaacagaagcgagtttagacggactccacgctcgggaaaaatcacgggaattagac
gggaaatttgctgaacttcaacagctgatgaaaagaaatgtacaactgatggaagaaaca
aaagatggagttgaggctttgaaaaatacaattaaggatgtgaggcttaaagttgtcgca
caaacggagcgactcataacagtagagaggaaagtcagcggtgtggctgataaggaaaca
caggacaaaatgagcagggagctgatgctagtgaaggaacaacaaaccagtgtcgagaac
agagttacacaattagaaaggataggacccatgggtggacagaacgatcagtccgcggat
atggttactcatcatgatcgtcaacttggaattatggatctccgacttgccgaactagac
ctaaggtttcaggtgatggagactgcaagttacaatggcgtcctgatgtggaaaatccgg
gactactccagaagaaagctggatgccaagttgggtaaaactatctccctttacagccaa
ccgttttacacagggaggtttggatataaaatgtgtgcgcgggtttatttgaacggggac
ggtgtcggcaaaggaagtcatctgtcccttttctttgtgattcaaagaggggaatacgat
gctctgcttccttggccgtttagacagaaagttactctgatgctcttggaccaggattct
ggatcgcgccacctggtggattcattccgaccagatataaccagttcgagcttcaagcgc
cctaccactgatatgaacgtcgcctcgggatgccccctgtttgtcagtcacggtgttctt
gagactcccacatttctacaggatgacaccattttcctcaaagtagtcgtggatctggaa
ggtctgcgacaacactga
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