Crassostrea virginica (eastern oyster): 111128879
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Entry
111128879 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111128879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111128879
04121 Ubiquitin system [BR:
cvn04121
]
111128879
Membrane trafficking [BR:
cvn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
111128879
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111128879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
TRM82_WD
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_SPT8
ASA1
CFAP251_N
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
F-box_4
Beta-prop_HPS5
Beta-prop_RIG_2nd
Mcl1_mid
WD40_like
PAC11
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
PQQ_2
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
111128879
NCBI-ProteinID:
XP_022330517
UniProt:
A0A8B8DQJ8
LinkDB
All DBs
Position
4:47858062..47866052
Genome browser
AA seq
444 aa
AA seq
DB search
MSADRDRKEGSLSTLPPEIVEKIFLYLDAADIARLSCVCVAWREIANVDHIWLHHCLERK
WMRFGLHDNILHEFPLSKPQSNVSNKSPYFQLYIPKETRLSPICRWKNVFIRVFHLFKNW
EKGRYTMPVTLKGHKDQVKAIDCNRTCIVSGSEDHTVIVWSLHTCSKLHTIKVHSDAVTS
VKLKDNMLVTGCGDSSLRVIDCTTGQLAFSLQGHQGSVDHLAIIEDYIVSAGTDKTVMVW
SISKQKHVHTLRGHVDEIECMAYCGYTVVTGSWDKAVMVWNVRQEDAVQMLHGHREVVTC
CYCTEDTVVSGSGDSDVRIWRIPSGECLHVLSAHEAEVYCLACSAEVIASGSSDSTIIIW
SYTGSLLHTLTGHLGVVRCLHINEFRLVSGGDQKKINVWDYRRGTLLNTIHRNPTRLHKM
LVTDTKLITASPETPGTVTVISFW
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagatagagacagaaaggaaggcagtttatcaacccttcctcccgagatagtg
gaaaaaatctttttgtatcttgatgctgctgacattgcaagactatcctgtgtctgtgta
gcatggagagaaatagcaaatgtggatcatatatggcttcatcactgtctggagagaaag
tggatgagatttggtcttcatgataacatcctccatgaatttcctctgagtaaaccacag
tccaacgtttccaacaaatcaccttactttcagctctatattccaaaagagactcgcctt
tcaccaatatgtcgctggaagaatgttttcatcagagttttccatttattcaaaaattgg
gagaaaggacgatacacaatgccagtgacccttaagggacacaaagatcaggtcaaggcc
attgattgtaacagaacgtgtattgtaagtgggtcagaagaccacacagtgattgtatgg
agtttacacacttgctcaaaactacacaccatcaaggttcattcagatgctgttacatcg
gtcaaattgaaggacaacatgctggtgacagggtgtggagacagctcgttgcgagtcatc
gactgtaccacaggacagctggcattctccctgcagggtcatcagggctcagtggatcat
ttagccatcatagaggactacattgtcagtgccggaacagacaagacagtgatggtatgg
tccatatcaaagcagaaacatgtacacacattacgagggcatgtggatgaaattgagtgc
atggcctattgtggttacactgtggtgacgggatcctgggacaaagcagtgatggtgtgg
aacgtccggcaggaagacgcagtgcagatgcttcatggtcatagagaagtcgtgacatgc
tgttactgcacggaggataccgtggtgagtgggagcggagattctgatgtccgaatctgg
cggattccatccggagaatgcctgcatgtcttgtctgcccacgaggctgaggtctattgc
ttggcttgttcagcagaagtaattgcttcaggatcatcagatagcaccatcatcatttgg
agctacactggaagccttctacacacactgacagggcatctaggtgtggtcaggtgttta
catatcaacgagtttcggttagtgagtggaggggaccagaagaaaatcaatgtctgggac
tacaggaggggtacattgttgaacaccattcatcgaaatccgactaggctacacaagatg
ttggtcacggacaccaaactaatcacagcctcccccgagacccccgggacagtgaccgtg
ataagtttctggtga
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