Crassostrea virginica (eastern oyster): 111129069
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Entry
111129069 CDS
T09197
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-TRAF_2
zf-RING_5
Golgin_A5
zf-C3HC4_5
DUF2730
Sina_ZnF
HALZ
Exonuc_VII_L
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
111129069
NCBI-ProteinID:
XP_022330853
EnsemblRapid:
LOC111129069
UniProt:
A0A8B8DTK7
LinkDB
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Position
4:33824479..33847427
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AA seq
609 aa
AA seq
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MDHNINRTSQRICHAAQGIFLLTWKLFLTSCVESNEVYQLLEINHCCNKVTERKQYSLAS
LNPSLSAAEIPQFVNKLQDKYVCPVCNSVLRNAMQLQCGHQICETCIDPLFGENTKASCP
VRTDEECEDSFSKNEIYKDMCTRREVMKLPVYCQYSEYGCSETPEWKNLQSHCEKCEYKP
VECDKCQEKVPQNQLTVHKESKCSYRDVVCDHCSQDVPFCQMKSHFEHDCPEYPLKCPNG
CEDVVLRRIEMESHLQTCPKKSIPCGYRSIGCDFFDIIEKVEKHQVVATDHHLRLAVSFS
GQTSDQNKALHLEIEERKTETETLKSTVQELHHENVKLKNEIQPLVNSLTKDTKKKLVTL
TERLINLERMVEKQPKREVLEKQEQAISSLKEDLKVCKEQITQLERVGPQGGSTQGGIPQ
DIKNQLKTNEKQMAIQDIRLAELDLRFQVLETASYDGVLMWKIRDYYRRKQEAKSGRTLS
LYSQPFYTSRTGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFQQKVSLMLL
DQDSFRRHVCDTFQPDTTSTSFKRPTTEMNVATGCPLFISHSVLETKTFLKDDTIFIKVK
VDTTNIPVP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaatattaacagaacttcacaaagaatttgtcatgctgcgcaaggaatattt
ctattaacttggaagttatttcttacttcctgtgtagaatctaacgaagtttaccaacta
ttagaaattaatcattgctgtaataaagtgacagaaagaaaacagtattccttagcttca
ttaaaccctagcctgtctgcagcagagataccacagtttgtcaataaactgcaggataaa
tatgtctgccctgtgtgtaattctgtgcttcgcaatgccatgcaacttcagtgcgggcat
cagatttgtgaaacctgcattgatcctttgtttggagagaacacaaaggccagctgccca
gttagaacggatgaagagtgtgaggattcattttccaaaaatgagatctacaaagatatg
tgtactagacgggaagtgatgaagctgcctgtgtactgtcaatacagtgaatatggttgt
tcagagacacctgagtggaaaaacttacagtctcactgtgaaaaatgtgaatataagcct
gtggaatgtgataaatgccaggagaaagttcctcagaatcagctgactgttcacaaggag
tccaagtgcagctatcgggatgtagtgtgtgaccattgttctcaagatgttcccttctgt
cagatgaagagtcattttgagcatgactgcccggagtatcccctgaagtgtccaaatggc
tgtgaggatgttgtcttacgaagaatcgagatggaaagtcacttgcagacctgtccaaag
aaatcaattccttgtggatacagaagtattggatgtgatttttttgatatcattgaaaaa
gttgaaaaacatcaagtcgttgcaacagatcaccatttgaggttggcagtatccttctct
ggtcaaaccagtgaccaaaataaagcactgcatttagaaatagaggaaagaaaaacagaa
acagaaactttgaaatctacagtccaggagctacatcacgaaaatgtaaagttaaaaaat
gaaatacaaccattagtcaattccctaacaaaggacactaaaaagaagttggtgacgttg
acagaaagattaattaacttggaaagaatggttgaaaaacaacctaagcgagaagtttta
gaaaagcaagaacaagccattagttccttgaaggaagatttaaaagtctgcaaggaacaa
attacccagttagaaagagtcggaccacaaggtggaagtacacaagggggaataccacaa
gatataaagaatcaattgaaaacaaatgagaaacagatggcaattcaggacattagacta
gcagagttggatctaagatttcaagtgttagagacggccagttatgatggcgtacttatg
tggaagattcgggactactacaggagaaagcaagaagccaaaagtggtaggaccctttcc
ttatacagccagccattttatacgagtcgcaccggctacaagatgtgtgccagggtgtac
ttgaatggcgacggcatgggcaaaggcactcacttgtctctgttctttgtggtgatgagg
ggggaatatgatgctctactcccctggcctttccagcagaaggtgtctctgatgcttctg
gatcaggactcgttcagaagacacgtgtgcgacaccttccaaccagacaccacaagtacc
agcttcaaacgacccacaaccgagatgaacgtcgcaacaggatgcccacttttcatctcg
cacagtgtgctagaaacaaaaacgtttctgaaagacgatacaatattcatcaaagtcaaa
gttgacactaccaacataccagttccttaa
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