Crassostrea virginica (eastern oyster): 111129814
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Entry
111129814 CDS
T09197
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111129814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-TRAF_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
TRAF3_RING
zf-RING_UBOX
zf-RING_2
STX6_10_61_N
Adenylsucc_synt
Exonuc_VII_L
zf-RING_5
DUF8567
FKBP15
Coagulase
Prok-RING_4
MobA_MobL
DUF724
DUF7664
Prominin
ISG65-75
V-SNARE
Motif
Other DBs
NCBI-GeneID:
111129814
NCBI-ProteinID:
XP_022331979
UniProt:
A0A8B8DWU7
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Position
4
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AA seq
561 aa
AA seq
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MLTPQVTPPSSLSSHTPAGQPEFVALDLSYVCILCHQVLRDAVQTPCGHRLCQQCGEDYL
REGTPRPCPYREEHCEALSPAEVQRDSSARREIRQLPVYCSNKARGCQVKVKWKDLEKHL
AECYHEPLLCPNRDRGCDAVVSRGDLSEHQLTCDYMPTQCEFCGEVLPKLSKERHDNEVC
QKIPIRCPYGCGIDPIPRDQMSRHQQTCPRQIVVCKFASMGCRFKGLAEEVALHEKQSMK
EHVHQTTQQMANIDLYDLDIQKEMQELNDLGQEIRQKVKDIEEEMEEIQHLVKEAKSEGR
SRKLDVVELTERIIHVEKQVEELRPEVQQRIGSDLNILREKVRTERERLDRLVAAQVMGE
GATADPTTSRTDPFEDLQKQTRQLGLQEAKLGELDLRFQILETINYNGVLLWKISNYYRR
KQDAVAGTALSLYSSPFFTSRYGYKMCCRAYLNGDGMGKNTHFSIFFVVMQGEYDALLPW
PFKQKVSFMILDQSGSRRHLTDSFRPDPNSSSFKRPLAEMNIASGCPLFVSQTILETSNS
YVKDDSLFVKVTVDTSGLEPI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccccaggtcacaccccccagcagtttgtcctctcacactcctgcggggcag
ccagagtttgtggcgctcgacttgagttacgtgtgtatcctgtgtcaccaggtcctccgg
gatgctgtacagacgccgtgcggtcatcgactctgtcagcagtgtggggaggattacctc
cgcgagggaacccccaggccctgcccctaccgggaggagcactgtgaggcgctgagccct
gctgaggttcagcgagattccagcgccaggagggagatccgtcagcttcctgtttactgc
tccaataaagcccgaggctgccaggtcaaggtcaaatggaaggatctggaaaagcatttg
gcggagtgttatcatgaacctctactgtgtccaaacagagaccgcggctgtgatgcggtg
gtgtcccgtggcgacctctcagaacatcagctgacttgtgactatatgccgacccagtgt
gaattttgtggggaggtgctccctaaactgtctaaggagagacatgacaatgaagtgtgt
cagaaaattcccatcaggtgtccgtatggttgcggaattgacccaattccaagggaccag
atgtccagacaccaacaaacttgtcccagacagatcgtagtttgtaaatttgcctccatg
ggatgtagatttaagggtctggcagaagaagtagctctgcacgagaaacagagcatgaag
gagcatgtccatcagacaacccagcaaatggccaacattgacctctacgatttagacatt
caaaaagaaatgcaggaattgaatgaccttggacaggagatcagacagaaggttaaggac
attgaggaagagatggaagagatccagcatttggtgaaagaggccaaaagtgaaggtcgc
agtagaaaactggatgtggtggagttgacagagcgaataattcatgtggagaaacaggtg
gaggagttaagacctgaggtccagcagcggatcggcagcgacttgaacatcttgagggag
aaggtcagaacagagagggagcgccttgataggctggtggccgctcaagtgatgggggag
ggggccacggcggatcctaccacctcccgcacagacccatttgaggatttacagaaacag
actcgccagttgggtctgcaggaggctaaactcggagagctggacttacgtttccagatt
ttagagacaatcaattataatggagtgctgctttggaaaatctcaaactactatcgcaga
aaacaggatgccgtagcgggaactgctctctcgttgtatagctctccattttttacaagt
cgctatggatacaaaatgtgctgtcgtgcttatctaaacggcgacggcatgggaaaaaac
acacatttttctatattttttgttgtgatgcagggggaatacgatgctcttctgccatgg
ccattcaaacaaaaagtgtctttcatgattttggaccaaagcggaagcagaagacatttg
acagactccttccgcccggatccaaatagctctagttttaagaggccgctcgcggaaatg
aacattgcctcgggctgcccattgtttgtcagccaaacgatcctggagacctccaactct
tacgtcaaagatgacagcctctttgtcaaagtcaccgtggacactagtggattagagccc
atttaa
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