Crassostrea virginica (eastern oyster): 111130067
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Entry
111130067 CDS
T09197
Name
(RefSeq) putative transcription factor p65 homolog
KO
K04735
transcription factor p65
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04137
Mitophagy - animal
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111130067
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111130067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111130067
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
111130067
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
111130067
NCBI-ProteinID:
XP_022332457
UniProt:
A0A8B8DW43
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Position
4:20840174..20848192
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AA seq
614 aa
AA seq
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MAELNFGFDTNMGLGSNDLRGLLMDGNPELCLDSGENELVQQLIATQQQQEQYTNNTPQM
PVTQTPKAQRQTGRGGQHKTVDGIFVEITEQPKPRGLRFRYECEGRSAGSIPGENSTAEK
KTFPTIKINNYTGTAVIVVSCVTKDTPYEPHPHNLVGRDCKRGVCTLKVKDTNVISFPHL
GIQCAKKKDVENNLKQRKEINVDPFQSGFKHLNKINSIDLNVVRLCFQVFLPDENGKITR
IVPPVVSQCIHDKKAMNELVICRVDKSSGKAKGGDEVFLLCEKINRDDIVVRFYEETQFG
ECIWEDFADFSTNDIHRQYAIVFRTPPYKDTMITRPREVKMQLKRNNEPETSDSIPFMYM
PEDPDPDRIMEKRKRKADQLKNWGFDLNVSGEDIKQRLKVKATKSRIKQEVPEVPFVDGM
MGGVSPMPPVSNVTTTHTKEGTSLNVRTLDNTTMGNVTITPTESVRQQLANLPDDMQIKL
LQNLAVRKLQEEASNRINQPSPLDTSNTAAFIQSLIGGSMPMTQGSNPTQTPTQNLLLGG
AQGLTQATGMEQENVDLLFQTYLGDQDQNMSFDSFGSNMGNIMNFDPTLVTSGGASGDQG
MDETRAAVQSLPLS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcttaactttggatttgatacgaacatgggcctgggtagtaatgacttacgg
gggctattaatggacggtaacccagaactctgtctggattcgggtgaaaatgaacttgta
cagcagttaattgccacacaacaacaacaggagcaatatacaaacaacacaccacaaatg
ccagtgacacaaacccccaaggctcagaggcagacaggaagagggggtcagcacaaaaca
gtggacgggatctttgtcgagatcacggagcagcccaaacccaggggcctgagattccga
tatgagtgcgagggtcgctcagctggcagcattccgggggaaaacagcactgctgagaaa
aagacttttcccaccattaagataaacaactacacgggaacagctgtcattgtggtctcc
tgtgtcaccaaggacacgccctacgaaccccacccccacaacctggtggggagggactgt
aagaggggggtctgcaccctaaaggtcaaggacacaaatgtcatcagttttccacattta
ggaattcaatgtgccaaaaagaaagatgtagagaataatctgaaacaacggaaggaaata
aacgtagatcctttccagagtggttttaagcacttgaacaaaatcaacagcatagacctt
aacgtggtacgcctgtgtttccaagtcttcctgccagacgaaaacggaaaaattactcgc
atcgtccctcccgtggtgtcccagtgtattcatgataaaaaggcgatgaacgagctggtc
atctgccgagtggacaaatcctcagggaaggcaaagggaggggacgaggtctttctcctc
tgtgagaaaatcaacagagatgacatcgtcgtgagattctacgaggagacgcagtttggg
gaatgtatctgggaagactttgctgacttcagcacaaacgacatccacagacagtatgct
atagtgtttcgcactccgccttacaaagacacgatgatcactcgaccgcgagaggtcaag
atgcagctgaagcggaacaatgaacccgagacaagtgactccattcccttcatgtacatg
ccagaggatccagatcctgacagaatcatggagaagaggaagaggaaggcagatcagcta
aagaactggggctttgatctcaatgtttctggggaggatatcaagcagagactaaaggtg
aaggccaccaagtccaggatcaagcaagaagttccagaggtcccgtttgtggatggtatg
atggggggagtttctccgatgccgcccgtgtccaacgtcaccaccacccacacaaaggag
ggcacctccctcaatgtccgcaccctggacaacaccaccatgggtaacgtcaccatcacc
cccacagagagtgttcgacagcagctagccaaccttccggacgacatgcaaatcaaacta
ctgcagaacctggcggtgaggaagctccaggaggaggccagcaaccgcatcaaccagccc
agtccgctggacaccagcaacaccgccgccttcattcagagtcttatcggggggagcatg
ccaatgacacagggctccaaccccacccagacccctacccagaacctgctgctgggcggg
gctcagggcctgacccaggccaccgggatggagcaggagaatgtagacttactgttccag
acctacctcggtgatcaggaccagaacatgtcctttgacagcttcggttcaaacatggga
aacattatgaactttgaccccactttggtgacctctggaggggcgtcgggcgaccagggg
atggacgagacgcgggcagcggttcagtccctgcccctgtcctga
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