Crassostrea virginica (eastern oyster): 111130116
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Entry
111130116 CDS
T09197
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111130116
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvn01007
]
111130116
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111130116
Enzymes [BR:
cvn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111130116
Amino acid related enzymes [BR:
cvn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111130116
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111130116
Prokaryotic type
Other AARSs
111130116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1_2
EGF_LMN_ATRN
DZR_2
Motif
Other DBs
NCBI-GeneID:
111130116
NCBI-ProteinID:
XP_022332544
UniProt:
A0A8B8DYH1
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Position
4:complement(31157849..31169260)
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AA seq
988 aa
AA seq
DB search
MSLLALVTKHWRLQWAKSHLQIKACLFCDNIKIKKNKSSGNKYKDTVYLPKTDFVLSLKK
NKTGIGLQKSELSSLYKWQQHEDRQKQFVLHDGPPYANGKLHVGHAINKVLKDIINRFHL
LQGYNIHYVPGWDCHGLPIELKALTKNKKEKLSDQAVRALSKAFAEDSMHVQKESFQNYG
VMADWGGQVYRTMDPQYEVKQLDVFYTMYEKDLIYQGFMPIYWSPSSKTALAEAELEYDP
DFVSKAVYVKFPVAADSVRSSAFNDADKQRLFALIWTTTPWTLPANEAICYGSDLIYCLV
KNHSNDEVYICGKEFVNRLNSILSENSSVIQEFKGSDLKDFRYINPLKQLMNPSLDVQKL
PFLEGGHVTSDVGTGLVHTAPAHGQEDFQKGIQHGLSVDTLVDEMGRYTSETGPLLEGKK
VHVDAEDTVISLLRDYVLLQESYKHSYPIDWRTKKPVILRACKQWFIDTSKLQDQAMECM
KEVKVYPDSLRQNMDAQLNRKYWCISRQRVWGVPIPVFYHRDTGEVLINREIFNHVRGQI
SRHGSNCWWSMTIEELLPQEILSRSGLGKPGDYEKGSDIIDIWFDSGTSWASVLPGDKVA
DVYLEGLDQFRGWFQSSLLTSVACRGIAPFKKLVVHGFAVDEEGHKMAKSVGNVVDPTQI
INGFSKKTGIPYGLDVLRLWVANSGLQTKVAIGNNILDSHQEELFQIRKMLRHLLGNLQG
FDPSLLRISYTDLLPQDQCLLSMLHTYGTQVTSLYEEFKFGRVLALMQKFLSDLSKFYIA
TTKDRLYCDNVHSLNHQSCLFTLYHTLEVLTKSIAPILPSLAEEVYKFHPEKKETPLFYN
RWYSLDPSWSNPEVEELVSTALLIRDKINEVLISEPPNNYDAVVITNNSLFLDLQNLQQT
ETAIDSPLCEILQTAVTTIKQSQSGEIIHGDRDHVIRGKHVDSDFTVVLTVANGTKCERC
RRNTAKTGELCQRCSNVLLHIGNMEAKT
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgtctctactagccctagttacgaagcattggagattgcagtgggcaaaaagtcacctg
caaattaaagcatgcttattctgtgataacatcaaaatcaagaaaaacaaatcttctggg
aataaatacaaagataccgtttacttaccaaaaacggactttgttttaagtttaaagaaa
aacaaaaccggtattggattacagaaatcagaattaagctctctctataaatggcaacaa
catgaagacagacagaagcaatttgttttgcatgatggtccaccatatgcaaatggaaag
ttacatgttggacatgcaattaataaggttcttaaagacataatcaatcgcttccactta
cttcaaggatacaatatacactatgtaccaggatgggactgccatggacttcctatagaa
ctaaaggcattaacaaaaaacaagaaagagaaactgtctgatcaagctgtcagagcattg
tctaaggcatttgctgaagattccatgcatgttcagaaggagagtttccagaactacggg
gtgatggcggactggggaggccaggtttatcggaccatggaccctcagtatgaagttaag
cagctggatgtgttttacacaatgtatgaaaaggatttgatttatcaaggctttatgccc
atctattggtcaccatcatcaaagacagcattggctgaagcagaattggaatatgaccct
gattttgtcagcaaagctgtatatgtcaaatttcctgtagcagctgattctgttcgaagc
tctgctttcaatgatgctgataaacaacgattatttgccttaatttggaccacaactccc
tggacgttacctgctaatgaagctatctgttatggatctgacttaatatactgcttggtg
aaaaatcatagtaatgatgaagtctacatttgtggaaaagaatttgtgaatcggcttaat
tccattctaagtgaaaattcatctgtcatacaagaatttaaaggttctgatttgaaagac
tttagatatataaatccattgaaacagctcatgaatccatccttggatgtacagaagtta
cctttcctagagggaggtcatgtgacctctgatgtaggcactggattggtccacacggct
ccagctcatggacaagaagatttccaaaagggaattcagcatggcctctcagtggacact
ttagtagatgaaatggggaggtacacatctgaaacaggtccactattagaggggaaaaaa
gttcatgtagatgctgaagatacagtgatttccttactgagagattacgtacttctacag
gagagctataagcacagttatcccatagattggagaaccaagaaacccgtcattttacgg
gcttgtaaacagtggttcatagacaccagtaaactgcaggatcaagccatggagtgtatg
aaagaggtaaaagtttatccagactcgctgcggcaaaacatggatgctcaactgaacagg
aagtactggtgcatttctcgtcagcgggtctggggcgtgccgattcctgtcttctatcat
cgagacacgggggaagttctcatcaacagagagattttcaatcatgttcgtggtcagata
tcaagacatggctcaaactgctggtggagcatgactatcgaagaactgctccctcaagaa
attctctcaaggagcggccttggaaaacccggtgattatgaaaaagggagcgacattatt
gacatttggtttgacagtggcacatcatgggcatctgttctcccaggtgacaaggtcgct
gatgtgtatctggagggtctggatcagttccgtgggtggttccagtcctcacttctcacc
agtgtggcttgtcgagggatagctccattcaagaagctggtagttcatggttttgctgtt
gatgaggaaggacacaaaatggccaagtctgttgggaatgtagtggatcccacccagatc
atcaatggattcagtaagaaaactggaatcccttatggacttgatgtactgaggttgtgg
gtggcaaactcagggctgcagactaaggttgccattggcaacaacatactggatagccat
caggaggaactgtttcagattcgtaaaatgctacgtcatttactgggaaacctacaagga
tttgaccccagcctcctcaggataagttacacggacctgcttcctcaggatcagtgtctc
ttgtccatgctgcacacgtacggaacccaggtgacttcattgtatgaagaatttaagttt
ggaagagtgctggcactcatgcaaaaatttctgagtgatctctccaaattttacatcgcc
acaacaaaagataggttatactgtgataatgtccacagcctaaatcatcaatcctgtctg
tttactctgtatcacactctggaggtcctcactaaatccattgcccccatcctgccatca
ttggctgaagaggtctacaagtttcatccggagaaaaaggaaactccactgttttacaac
aggtggtactctttagacccaagctggagtaatccagaggttgaggagcttgtttctact
gctttgttgattagggacaaaataaacgaagttttaatatctgaaccaccaaacaattac
gatgctgttgtgattaccaacaattcactgtttttggatctacagaacctccagcagaca
gaaactgcaatagactcccctctgtgtgaaatactacagacagcagtgactactataaaa
cagtcacagtcaggggagatcatccatggagacagggaccatgtcattcgcggaaagcat
gtagacagtgattttactgtggtactgacagtggctaatggcacaaagtgtgaacgatgt
cggagaaatacagccaagaccggtgaattgtgccagcgatgttccaacgttcttttgcat
attggaaatatggaagccaaaacataa
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