Crassostrea virginica (eastern oyster): 111130375
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Entry
111130375 CDS
T09197
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111130375
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-TRAF_2
HALZ
Sina_ZnF
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
111130375
NCBI-ProteinID:
XP_022333101
UniProt:
A0A8B8DXX9
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Position
4:complement(21825039..21859348)
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AA seq
666 aa
AA seq
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METSPASLNPSLSAAEIPQFVDKLQEKYVCPVCNSVLRNAMQLQCGHQICEICIDPLFGE
NTKASCPVKTDEECEDSFSKNEIYKDMCTRREVMKLPVYCQYSEYGCSETPEWKNLQSHC
EKCEYKPVECDKCQEKVPQNQLTVHKESKCSYRDVVCDHCSQDVPFCQMKSHFEHDCPEY
PLKCPNGCEDVVLIRIEMESHLQTCPHKSIPCGYRSIGCDFFDIVEKVEKHQVVATDHHL
RLAVSFSGQTSDQNKALHSEIEERKTEIETLKSTVQELHHENRKLKDEIKPLVNSLKKDT
KKKLVTLTERLINLERMVEKQPKREVLEKQEQAISSLKEDLKVCKEQITQLERVGPQGGS
SQGGIPQDIKNQLKTNEKQMAIQDIRLAELDLRFHVLETASYDGVLMWKIRDYYRRKQEA
KSDIKNQLKTNEKQMAIQDIRLAELDLRFHVLETASYDGVLMWKIRDYYRRKQEAKSDIK
NQLKTNEKQMAIQDIRLAELDLRFQVLETASYDGVLMWKIRDYYWRKQEAKSGRTLFLYS
QPFYTSRTGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFQQKVSLMLLDQD
SFRRHVCDTFQPDTTSTSFKRPTTEMNVATGCPLFISHSVLETKTFLKDDTIFIKVKVDT
TNIPVP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctccagcttccttaaaccctagcctgtctgcagcagagataccacagttt
gtcgataaactgcaggagaaatatgtctgccctgtgtgtaattctgtgctacgcaatgcc
atgcaacttcagtgcgggcatcagatatgtgaaatctgcattgatcctttgtttggggag
aacacaaaggccagctgtccagttaaaacggatgaagagtgtgaggattcattttccaaa
aatgagatctacaaagatatgtgtactagacgggaagtgatgaagctgcctgtgtactgt
caatacagtgaatatggttgttcagagacacctgagtggaaaaacttacagtctcactgt
gaaaaatgtgaatataagcctgtggaatgtgataaatgccaggagaaagttcctcagaac
cagctgaccgttcacaaggagtccaagtgcagctatcgggatgtagtgtgtgaccattgt
tctcaagatgttcccttctgtcagatgaagagtcattttgagcatgactgcccggagtat
cccctgaagtgtccaaacggctgtgaagatgttgtcttaataagaatcgagatggaaagt
cacttacagacatgtccacataaatcaattccttgtggatacagaagtattggatgtgat
ttttttgatattgttgaaaaagttgaaaaacatcaagttgttgcaacagatcaccatttg
aggttggcagtatccttctctggtcaaaccagtgaccaaaataaagcactgcattcagaa
atagaggaaagaaaaacagaaatagaaactttgaaatctacagtccaggagctacatcac
gaaaatagaaagttaaaggatgaaataaaaccattagtcaattccctaaaaaaagacact
aaaaagaagttggtgacattgacagaaagattaattaacttagaaagaatggttgaaaaa
cagcccaagcgagaagttttagaaaagcaagaacaagccattagttccttgaaggaagat
ttaaaagtctgcaaggaacaaattacccagttagaaagagtcggaccacaaggcggaagt
tcacaagggggaataccacaagatataaagaatcaattgaaaacaaatgagaaacagatg
gcaattcaggacattagactagccgagttggatctgcgatttcatgtgttagagacagcc
agttatgatggcgtacttatgtggaagattcgggactactaccggagaaagcaagaagcc
aaaagtgatataaagaatcaattgaaaacaaatgagaaacagatggcaattcaggacatt
agactagccgagttggatctgcgatttcatgtgttagagacagccagttatgatggcgta
cttatgtggaagattcgggactactaccggagaaagcaagaagccaaaagtgatataaag
aatcaattgaaaacaaatgagaaacagatggcaattcaggacattagactagccgagttg
gatctgcgatttcaagtgttagagacagccagttatgatggcgtacttatgtggaagatt
cgggactactactggagaaagcaagaagccaaaagtggtaggacccttttcttatacagc
cagccattttatacgagtcgcaccggctacaagatgtgtgccagggtgtacttgaatggc
gatggcatgggcaaaggcactcacttgtctctgttctttgtggtgatgaggggggaatat
gatgctctactcccctggcctttccagcagaaggtgtctctgatgctcctggatcaagac
tcgttccggagacacgtgtgcgacaccttccaacctgacaccacaagtaccagcttcaaa
cgacccacaaccgagatgaacgtcgcaacaggatgcccacttttcatctcgcacagtgtg
ctagaaacaaaaacgtttctgaaagacgatacaatattcatcaaagtcaaagttgacact
accaacataccagttccttaa
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