Crassostrea virginica (eastern oyster): 111134417
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Entry
111134417 CDS
T09197
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3-like isoform X1
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111134417
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111134417
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111134417
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C64
111134417
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
111134417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
zf-A20
Motif
Other DBs
NCBI-GeneID:
111134417
NCBI-ProteinID:
XP_022339102
UniProt:
A0A8B8EEN0
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All DBs
Position
5:complement(84938973..84979594)
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AA seq
1043 aa
AA seq
DB search
MQMDGDLTPKEIMDFKNDKNIVLCLGDDELKKSARSKEVSMNTPPFKQKFADSSPAKVHQ
LTELVKNDIDTTSHQRRRPFCLKSLYLYSALLPCLKLVNEEFKHFYNLIVLDLDVKDDLQ
RSKVINWCRTSKKLCPVKTRGDGNCLLHAVSLFLWGVEDRDLLLRRLLYLTLANDPKNMY
RTRWLMQYRNTVLDSPDLQLSLDSKDMDAEWESILKSTEDNPTEGSNYPSLEGIHLYVLA
NILRRPIIVLADRKARSVYGQSMQKDSIGGIYLPLEWKPTEISKSPITIAYSMNHFSPLL
PQRNVHDGRATDSEYVIPLVYHDFEPIALRFMMYAEEALGHDLINGYLETKNIPMTTSDS
ILEIPVAKSNYRIIKPALDIVQSHFEECQQIYQMWIRGVPVSRENHPTPVVTSQQNSVSH
PPAHQQSAKCPTLGCDLFGSPDYGGKCSDCFNKYTVEYSRQETERRNQMFVEPSAPLASM
PYLPSIHHCELSIMDENCQNFAKCGNRMSVHTYPFCHECQPETSATRQSIGQEESSSPPT
AVRNEPVDDSGLFGEGEVLRPLRLSTIEPATIGSNSSPRAAKCLSPSCENVGHPNYNNFC
KHCYSKLQTRTPLANTPEGPSSQTFLVNGESSSSRGTPSPGTSFIKPFEVVGNQLTMEQI
NQVGKCKFEGCQNYGYCNNNGLCEACFKRTRPSEVAMETQSSPQKASANSLKRLCSVPGC
KEEKLKNEQGFCLQCYLKSDLPSERVSREPIPPPDNSTLESKTPLETSELPQPCIVTSSK
DKVKCAASLCGARIYPPNQLCERCKGILEREYAAESNRSRSLEVNRYRPARQGNAYSPSR
RKCQTENCEFYGDKKYHGYCSNCFQVATSTAPVRSAPSVVAPRQNNTAPHARQSLNCVEP
GCDKFGDPSMSYRCTEHYRRAMQRAPPPHSSPYPLPAEVERYNVAEKDRVAAAAVPLPPQ
NYNIPVSTAAYNIPVSAAATPQHGGSQYIQTMQKVEGSRKGNKCKTSNCDNYGNPSSQGY
CNACYKSRTSGGNDPRQGRYMCC
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggatggagacttaacacctaaagaaatcatggattttaagaatgataaaaat
attgttctgtgccttggtgatgacgaactaaagaaaagtgcaagatcaaaagaagtgagc
atgaacacgccacctttcaagcaaaagtttgcggacagttcgccggcaaaagttcatcag
ctgactgaactggtgaagaatgacattgacacaacctcacatcagcgcaggcgacccttc
tgtctgaaaagcctgtacctgtattcagctctgctaccctgcctaaagcttgtcaatgag
gagttcaaacatttttacaatctcattgtccttgaccttgatgtgaaggatgatcttcaa
cgatccaaggtcattaactggtgtagaacatcaaagaaattgtgtccggtcaaaacaaga
ggggatggtaactgccttctccatgcggtttccctatttctttggggggtggaggatcgc
gaccttctattacgtcgactcctctatctgaccctagctaacgaccccaagaacatgtac
aggacgcgatggttgatgcagtacagaaacactgtcctcgatagtccagacttacagttg
agcctggactccaaggacatggatgcggagtgggaaagcattctgaagtcgacagaggac
aatcccacagaagggtcaaattacccctccctggagggaatccacctctatgttctggct
aacatactgaggcgtccgatcatagttctagcggaccggaaggctcgtagtgtttacgga
cagagtatgcagaaagatagtattggtggaatttatttaccattagaatggaaacctacg
gaaatcagcaaatcccctatcacaatagcctatagtatgaaccatttctctcccctttta
ccccaaagaaatgtgcatgatggacgagcaacagattcagaatatgtaattcccctagtg
tatcatgactttgaaccaatagctttgagatttatgatgtatgcagaggaagccttaggt
cacgatcttataaatggatacttagagacgaaaaatattccaatgacaacttcagactct
attttagaaattcctgtagcaaagtcgaactaccgaataataaagccagctttggacata
gtgcaaagtcattttgaggagtgtcagcaaatttaccaaatgtggatccgaggagtaccc
gtctcgagagagaatcacccaacccctgtagtcactagtcaacagaactctgtatcccac
cccccggcccatcaacagtcggccaaatgccccaccctggggtgtgatctgtttggatct
ccagattatggaggcaaatgctcagattgttttaataagtacactgtggaatatagtcgt
caggaaacggagagaagaaatcagatgtttgtagaaccctctgcaccattagcctcaatg
ccatatcttccaagcattcatcactgtgaattatctatcatggatgaaaattgtcagaac
ttcgctaaatgtggaaatcggatgtctgtgcatacatatcccttctgtcacgaatgccag
ccagagacttcagctacaaggcagtcaattggtcaggaggaaagttcatctccgcctacc
gctgtgcgcaatgagcctgtggatgatagtggacttttcggagagggagaagtactgagg
cccttaagattaagtacgattgaacctgctactatcggttctaattcttccccgcgggca
gccaaatgcctctcccctagctgtgaaaatgtaggacatccaaattataacaacttctgc
aagcactgttattctaaacttcagacgagaactccgctagccaacactccggagggtcct
tcatcccagacattcttagtgaatggggagagcagctccagccggggtacaccctccccc
gggacctcctttatcaagccttttgaagtggttggcaaccagctcacgatggaacagatc
aatcaagtaggaaagtgcaagtttgagggatgtcagaactacgggtattgtaataacaat
ggactctgtgaggcatgcttcaagaggaccagaccctcagaggttgccatggagacccaa
tcgtcaccccaaaaggcatccgccaacagtctcaaaagactgtgttctgtgccgggatgt
aaagaagaaaaactaaaaaatgaacaaggtttttgtttacagtgttaccttaaatctgat
ctgccttctgaaagggtcagtcgggagcccattcctccccctgataacagcaccctggag
tctaaaacccccctggagactagtgaactcccgcagccctgcatagtgaccagctccaag
gacaaggtcaaatgtgccgcctccctgtgtggcgcccgcatctaccccccgaatcagctg
tgtgagcgctgtaagggtatactggagagggagtacgctgccgagagcaacaggtcaagg
tcactagaggtcaaccgataccgaccagcaagacaaggaaatgcctattccccatcgcgc
cgcaaatgtcagactgaaaactgtgaattttatggagacaaaaaataccatggttactgc
tctaactgtttccaagtcgccacgtccaccgccccagtaagatccgctccctctgtggtg
gctcccagacaaaacaacactgcaccacatgctcgtcagagcctgaactgcgtggagcct
ggctgcgataaatttggagacccctccatgagttaccgctgcactgaacactacagacgg
gccatgcagagagcccctccccctcactcctctccgtaccccctccctgcagaagtagag
cgatacaatgtggccgaaaaagaccgagttgccgctgccgctgtgccacttccaccacag
aactacaacattcctgtgagcacggctgcgtataatattccagtcagtgctgccgcaaca
ccgcaacatggtggttcccagtatatacagaccatgcagaaggtcgaaggatccagaaaa
ggaaataaatgtaaaaccagtaattgtgataactacgggaaccccagcagtcagggttat
tgtaatgcttgttataaatctcggacttcaggtggcaatgacccaagacaggggagatac
atgtgttgttaa
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