Crassostrea virginica (eastern oyster): 111135917
Help
Entry
111135917 CDS
T09197
Name
(RefSeq) actin, cytoplasmic type 5-like
KO
K05692
actin beta/gamma 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
cvn04145
Phagosome
cvn04814
Motor proteins
cvn04820
Cytoskeleton in muscle cells
cvn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111135917
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111135917
09142 Cell motility
04814 Motor proteins
111135917
04820 Cytoskeleton in muscle cells
111135917
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111135917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111135917
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111135917
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135917
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111135917
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111135917
04147 Exosome [BR:
cvn04147
]
111135917
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111135917
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
111135917
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111135917
NuA4 complex
111135917
Chromatin remodeling factors
BAF complex
111135917
PBAF complex
111135917
GBAF(ncBAF) complex
111135917
SWR1 complex
111135917
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
111135917
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
111135917
Exosome [BR:
cvn04147
]
Exosomal proteins
Proteins found in most exosomes
111135917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
111135917
NCBI-ProteinID:
XP_022342106
UniProt:
A0A8B8EQ92
LinkDB
All DBs
Position
5:complement(31026061..31027851)
Genome browser
AA seq
377 aa
AA seq
DB search
MADEDIAAVVIDNGSGMCKAGFGGDDAPRAVFPSIIGRPRHSGVMVGIGQKYSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVSIQAVLSLYGSGRTTGIVLDSGDGVTHTVPIYEGYALPHAVSRLD
IAGRDLTDYFMKKILTERGYSFNTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEK
SYELPDGQVITIGNERFRCPEALFQPSFLGTESSGIHETTYNSIMKCDVDIRRDLYANTV
LSGGTTMFPGIADRMQKEITSLAPSTMKVRIIAAPERKYSVWIGGSILASLSTFQAMWIT
KQEYDECGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagatattgcagctgtggtcattgacaatggatctgggatgtgcaaggcc
ggattcgggggagacgacgcccccagggcagtgttcccctccatcatcgggcgacccaga
cactcgggagtaatggttggtataggacaaaagtactcttacgtgggggatgaagcccaa
agcaagagagggatcctcaccctgaaataccccatagagcacggaatcgtcaccaactgg
gacgacatggagaaaatctggcatcacaccttctacaatgagctccgagtggctccagag
gaacaccccgtcctcttaacggaggctccgctaaatcccaaagcaaacagggaaaaaatg
acacaaattatgtttgaaaccttcaacactcccgccatgtacgtctcaatccaagccgtt
ctctcgctgtatggttctggccgtacaaccggcattgtgctggactccggagacggtgta
acccacacagtccctatctatgaaggctacgccctcccccatgctgtatcgaggttggat
atcgctggacgcgacctcaccgactacttcatgaagaaaattctcacagaacgcggatat
tcattcaatactaccgctgaaagagaaattgtcagagacataaaagaaaagttgtgctat
gttgcgttggactttgagcaagaaatgacaactgctgcatcgtcctcctctctggagaaa
agctatgaactcccagatggccaggtcatcaccattggcaacgagcggttccggtgcccc
gaggcactgtttcagccatctttcctgggaacagaaagttctggaatccacgaaaccact
tacaacagtatcatgaagtgtgacgtagatatccggagagacttgtacgctaacaccgtg
ctctccgggggcacgaccatgttccctgggatagctgaccgtatgcagaaagaaatcaca
tctctggcccctagtacaatgaaagtgaggatcatcgcagcaccggagaggaaatattcc
gtctggatcggcggctccattcttgcttcactttccactttccaggcgatgtggatcacc
aaacaggagtacgatgaatgcggaccgtccatagtgcacaggaaatgtttctaa
DBGET
integrated database retrieval system