Crassostrea virginica (eastern oyster): 111137343
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Entry
111137343 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111137343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111137343
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111137343
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111137343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
DUF2095
DUF4174
Motif
Other DBs
NCBI-GeneID:
111137343
NCBI-ProteinID:
XP_022344488
UniProt:
A0A8B8EY45
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Position
5:17243896..17257492
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AA seq
947 aa
AA seq
DB search
MASGGRQESRRLEDSTMESLAEVFRCFICMEKLRDARLCPHCSKLCCFLCIRRWLTEQRS
QCPHCRASLHIHELVNCRWAEEVTNQLDTLKDCTPTPKKEDSEKDKCEDHQEKLSVYCWT
CKQCICHQCALWGGTHSGHTFKPLDDVYNEHMKKITEELNQLKRRHVELISLVQDVERNI
EGVKTAKDERVREIRNAVELMIARLETQLKSKLLTLMGQRGQVTQDTEKLESLIQKMNQK
LMNSGKNELISQSMELLQMFKQFHCKPMASFVTAPVPADFTSEIVPQYDTSTFVMKNFSV
LQQRADPVYSQPLHVSGLSWRLKVYPDGNGVVRGNYLSVFLELSVGLSENSKYEYRVEMV
HQASRDYTKNIVREFASDFEVGECWGYNRFFRLDLLASEGYLDTDTDTLILRFQVRPPTF
YQKCRDQQWYINQLESTHTQLINQITDLKERLLLLEMSRNKGSGKKGGATAESPLPLIDP
QSCGDGTLAQHSILYPKPIHPNSGSEIEIELCEEDHTAKDDSSTTDSIDEISQYDIEECE
HDNEAGATENNDENDIDEETMSVDNDVENSCEENNLDRLGAHSYTPTIPNITDHSAVDDE
AVLMQFLQEHSKYDNTWNVGNDGSDDSLSSDWLDSVLKFTTSTSSGASTSSKEAKGKEAK
KELKPKPPANKPAIPXKPTTATKPAPPPSTDYMLEHIHQRFTELAACTLAAANSAVTSET
EARAMVKSDQRDKKEKVLIPSLDLAKNDSGSKIKQEKEKKITNIQSADLDGVMGLDLTSA
SLEQETLSDISFDDIPSPRCFQSQLHLSTGIPHSPPDQEGGRKKRMIVTKNKVSAAATGS
QKDHGLPWSVNSVVKKASKPEHVKETKDKSGPTVTVGLSSVVVDKHGHSKDGNHLPSNSA
AGANSDHNTSSDSSSSSSGPLVEFSNQTAAKEKRSENGGSGDDTSVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggtggaagacaagagagtagacgtcttgaagactctacaatggagagccta
gctgaggttttccgatgcttcatttgtatggagaaattgagggatgctcgattgtgtcct
cattgttccaaactatgctgttttctgtgtataaggagatggttaacagaacagagatca
caatgtcctcattgcagagcttctctccatatccatgaacttgtgaactgccgctgggca
gaagaagtgacaaaccagttagacacgctcaaagactgtactccaaccccaaagaaggag
gactcagaaaaagacaaatgtgaggaccaccaggagaagctgagtgtgtactgctggacc
tgtaaacagtgtatctgtcatcagtgtgctctctggggaggaacacactcaggccatact
tttaaacctctggatgatgtgtacaatgagcatatgaagaaaatcactgaggaattgaat
cagctgaagcgtcgtcatgtggaactcatcagcttggtgcaagatgtggaacgcaacata
gaaggtgtaaagactgccaaagatgagagagttcgagaaatcaggaatgcagtggagtta
atgattgcacgtctagagacacagctcaagtcaaaacttctgacattaatgggtcagaga
ggccaagtaacccaggacacagagaaacttgagagtctgatacagaagatgaaccagaaa
ctgatgaacagcggtaaaaacgagctgatcagtcagagcatggaacttctacagatgttc
aaacagtttcattgtaaacccatggcctcttttgtcacagcccctgtgcctgcagatttt
accagtgagattgtccctcagtatgacaccagcacctttgtgatgaagaacttcagtgta
ctacagcagagggcagaccctgtctacagtcagccattacacgtctcgggcctcagctgg
agactcaaagtctatcctgatggcaatggagttgtcagaggaaattacctgtctgtcttt
ctagaattgtctgttggactttcagaaaattccaagtatgaatacagagtagagatggtt
catcaggcctctagggactacacaaaaaatatcgtaagagaattcgcctcggactttgaa
gtgggggagtgctggggctacaatcgatttttccgtctagacctcctggccagtgaggga
tacctagacaccgacacggacacactgatcctcaggttccaggtccgccccccaacattt
tatcagaaatgtcgagaccaacagtggtacattaatcagctggagtctactcatactcaa
ctcatcaatcagatcaccgatctcaaagagaggttgctactgcttgaaatgtccagaaac
aaaggttcaggcaaaaaaggtggagcaacagctgagtctcccttacccctgatagacccc
cagagctgtggggatgggactttagcccagcattccattctctaccccaaaccaatccat
ccaaactcaggctcggaaattgagattgaattatgtgaagaggatcacacagccaaggat
gatagttcaacaactgattccatagatgagatcagccagtatgatatagaggaatgtgaa
catgataatgaggctggagcaacagaaaacaacgatgagaatgacatcgacgaagaaacc
atgtctgttgacaacgatgtggagaatagctgtgaggagaacaacttggacagactgggg
gcccacagctacacccccaccatccccaacatcaccgaccacagtgctgtagatgatgaa
gctgtgctgatgcagttcttgcaggaacactctaaatatgacaatacttggaatgttgga
aatgatggttcagatgatagtctcagctctgattggttagacagtgtcctcaagttcaca
acgtccaccagtagtggagccagcaccagcagcaaagaagccaaaggcaaggaggctaaa
aaggagctcaagcccaaacctcccgccaacaagcctgccattccgnccaagcccaccact
gccaccaagcctgcccctccaccctccacggactacatgctggaacacatccaccagagg
tttactgagctagcagcctgtaccctggcagcggccaacagtgccgtgaccagtgaaact
gaggctcgagccatggtgaaatccgatcaaagagacaaaaaagaaaaagttctaatacca
tccttagatttagctaaaaatgattcaggaagcaaaattaaacaagaaaaggagaagaaa
ataacaaatatacagtcagcagatttagatggagttatgggccttgatcttactagtgct
tctctggaacaggagaccctgtcagacatatcatttgatgacattccctccccacgatgt
ttccagtcccagctacacttgtcaacaggcattccacatagtccaccagaccaagaggga
ggaagaaagaagagaatgattgttaccaaaaataaagtgtctgcagctgcaactggatct
cagaaagaccacggactgccttggtcagttaattctgtggtgaagaaggctagcaaacca
gagcatgtcaaggagacaaaggataaatctgggccaacagttactgtagggctatcctct
gttgttgtggataaacatggacacagtaaagatggtaaccatttgcctagcaacagtgct
gcaggagcaaacagtgaccacaacacatcatcggattcttcttcctccagttcggggcca
ctggtagagttcagcaaccagacagctgccaaggagaaaaggtcagaaaatggaggcagt
ggtgatgatacatcagtagtttaa
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