Crassostrea virginica (eastern oyster): 111138166
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Entry
111138166 CDS
T09197
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1
KO
K13158
heterogeneous nuclear ribonucleoprotein A2/B1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111138166
03041 Spliceosome [BR:
cvn03041
]
111138166
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111138166
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111138166
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
111138166
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111138166
Exosomal proteins of colorectal cancer cells
111138166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
111138166
NCBI-ProteinID:
XP_022345720
UniProt:
A0A8B8F079
LinkDB
All DBs
Position
5:45578628..45596639
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AA seq
447 aa
AA seq
DB search
MTGTDLGKQFVFEVLSKLVNVNAAFLNYCRQNVMQEKRMASDRVTSNNEASDDIQLSAVK
TEFEMNAESNNEASEEKMNQAVDDPIEGGFSWWLRGRSWLRHERPRGRNQGGDPDEPKAE
QYRKLFIGGLSYETNNSTLKTYFEKWGTIIDCVVMTDPQTKRSRGFGFITYEKVAMLEEC
QANRPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGGICDTTTEDDVREAFQEYGNI
KKIELIKDKATNKMRGFCFVTFDDYDPVDKCVLKKRFKICDKEVEVKKAENKNEGGGRGG
GHGGRGGPGGGWNQGGFNQGFNQGGLWGLGGNMGDDGGYQGGYGGGGGGYGGGYGNNQGG
NWGGNQGGYNEGYGGGYGGGQGGDWGGNQQFGTGYQNNFGGGVMKGGGYGQRDQGPYGGG
PGGYGGGGYGCGGGGGGGGCGYGGNRR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaacagatcttggcaagcagtttgtctttgaagttttgtctaaacttgtcaat
gtaaatgctgcatttctcaactattgcagacaaaatgtcatgcaagagaagagaatggca
tctgaccgtgtaacaagcaacaatgaagccagtgatgacatacagctctcagcagttaag
acagagttcgagatgaatgctgagagtaataatgaggcatcggaagagaaaatgaatcag
gcagtggatgatccaattgaaggaggattttcgtggtggctgagggggaggtcgtggttg
cggcatgagaggccgagagggagaaatcaggggggtgacccagatgaacccaaggcagaa
cagtacagaaagttgtttattggaggtctcagctatgaaaccaacaactctaccttgaaa
acgtattttgaaaaatggggaactatcatagattgtgttgtgatgacagacccacagaca
aaaagatcgaggggatttggatttattacctatgaaaaggtagctatgcttgaagaatgt
caggccaacagaccacacaaaattgatggacgggaagtggaaacaaaaagagcaatgcca
agagaggagtcaggaagatcagaatctcagaaatccaatgaaaaaatgtttgttggagga
atctgtgacacaacaacagaagacgatgttagggaagcattccaggaatatggaaacatt
aaaaaaattgagcttattaaagacaaggcaacaaacaaaatgaggggtttctgttttgtg
acctttgatgactatgatccagtcgacaaatgtgttttaaagaaaagattcaaaatctgt
gacaaggaggttgaagttaagaaggctgaaaacaaaaatgaaggaggaggtcgtggaggt
ggccatggaggacgaggaggacctgggggtggatggaatcaggggggtttcaatcaagga
ttcaatcaaggaggtctctggggtctcggaggaaatatgggtgatgatggcggctatcag
ggtggatatggtggtggcggcggtggatacggtggtggttatggcaacaaccaggggggc
aactggggcggtaaccaaggcggatataatgaaggttatggaggtggatatggcggaggt
caaggaggagactggggtggaaaccaacagtttggaactggctaccaaaacaactttggt
ggtggtgtaatgaagggcggtggctatggacagagagatcagggcccgtatggaggaggt
cctggaggttacggcggcggcggttacggttgtggtggtggtggtggtggcgggggctgt
ggttatggaggaaaccgtcgctga
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