Chlorella variabilis: CHLNCDRAFT_138232
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Entry
CHLNCDRAFT_138232 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_138232
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_138232
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
CHLNCDRAFT_138232
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CHLNCDRAFT_138232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
Ig_SMCHD1_6th
HATPase_c
SMC_hinge
ZapG-like
Motif
Other DBs
NCBI-GeneID:
17358609
NCBI-ProteinID:
XP_005851342
JGI:
ChlNC64A_1_138232
UniProt:
E1Z3V7
LinkDB
All DBs
Position
Unknown
AA seq
2244 aa
AA seq
DB search
MAARCRLLLPGVGEACVPLPISCQALRTAALQHFGAALPGEDFVITDTLETFESDADMQR
IRDGATLVVTSAANRALAAPASERISFQPHPKTLTMAGEFEYFAAQGRHPFVYALAEFVD
NSLRATRRTAPHPRSITVSLVVSGNNPATARGLVAIQDNGCGMNKLELTDWAVMNLSMEE
RGAAPQEPQPAGRGGGGAAGAPGAGRFLTGDLSFFGVGSKNAGFFMGSSIKVATKRADEL
YVHELRLAAADLEQRYQNREEVYVEEMIHRNPADPSTLSSAEQPFSCARTWVAAEGEDAE
AGGTGPSFTRVVISDLKPDVLRQIMADEQGTHICQELAHLYHYYLHGEQGNRSGGSKAMR
EGRLPNGEPFPEIVLRYQVDSRIVWQQRLAEVEDDLETRLLRAQQAELPFTLQGTVCGVL
YYFPFQNDQETVPVENPLTSSKPATSPFGPGARATQLGPTQLQPRGTQHLPHRATQAPRG
TQLVGGAAAAVGGLDEEEDEEAQGGWQSVPIFEAFWQGRLIPGARIDTLPFLEADMIPDE
AFRRLRGALFFGPAFRVTRNKLLFRDSLPEVLATAVPGERQMEAKLRQWLQRCHSTLDKS
VRFETLADSRTQSALRSKLGEETTAFDSITDGAHTISKGDVVRVNAKPQVVGRVLYFTIP
QAVREEGAYANGRLHIELIPAEVYGPSCEKQFSLRRLEAVLSEAEQQDHLQKELLRAPTS
LRIDPMRFSTGQALEFTVGDTIPETAASVLSGSGQRMSKTAFTSERFLVTQRLWRLPAGA
EGLAGGAGDADAAAAAAGEEEEGGRRAAKRQRKGRKGKGRQDENADPVAAAAAAGATECN
GMPPGAELMLTVENKTPLKDTFQFARISDGLHRFSLSGEGKAVTALKDIALGEALPPIKV
MFSDRFGNPVAMQPTQTPPCLSIAALTTGPLGELQQCEELQVVAQQAAAEDGLLITDLQL
LGSEVVASGPEAPGLQLLASGDGLSHPTGRQAQVQPSKQSLPAAEVQLSISLQGSAELES
VKLPLRLRAGAPQCLRLLPGHPWEAAQQDGGAGVVTLQSGGSLAAFQVVVFDAWGNPTAP
SADLGFTVLAECQATGPQAREFTPSGGGITTVEGLVGVSSTGASGPATFKLSLKSYPCNA
STEAAVAVADPTTALTFPLAVEPSMMPTSIQVLRDGQPLPTKEVQGDDGPITVALLDDVS
AGSSVVGLCFVLLDEGGTPAAQQLTGKVTLSWKSGSKKFTWDGEGFKLPPVKVPESVANE
SNQWMRFTSIDPAVMLEMPLEIRGVPAEPASWTISMVDQVTSQNSEVLGVVQCGQPFALE
MEAIDAFNNRCGGGSAALPLPGLTLESEGPLQYNEQEWEQGWVSQGGEQVYAVRMIVSGH
PGRVKITVRDTGGEGSNSLLGEDSLFVELRAGPPAQLAVEGPATLECGTKMAIPQLRVRV
CDSAGNPTTGENFEVSLCSSALATDGTGRAASVSVSGGNKIKLKQGVAVFKDVRVVADEA
GSYALRVQGASRKVAVQDAVLHLIMQQLNAVTNLRVLLSEVLESSSCQAGTCSELHVAVM
TENGLSLPPEVAVASLALKVSPPGGGKNDVVSYMLPAPEQPDQPVELQTEDGHYVFQLPE
LTAAGTYTAVAEYAEARPDLAAGLSNKDAKLRSASVRFEVHPCQPVTMRLEAASLPEKVA
VTNGSSGKQRLILRNAAVQLQDVYGNAAGACGVQVRCRLRLPTGAAADSSSHLPELQSGH
DLAPQETDERGRAFLGDLSIAEGSGHAASGALQCELVCEALGLYPSSAHELETDGDGWAV
CWSCPVLFSDDAARFAHIERLNQQRGELAQRREELNLRISGAQQALAEAQERQHQAQQAM
ASKEEGLPAPAPNTLNAAKKQLAAARRQAEAAAVEEPEDVVEARYGNPKSTLTASIDRIL
QSGDPGLVGVVAQLATVDDKALSAVLVAACRSQLATVVVQDIPARQRVAAMLVKMDYPVP
DMLPATMMLGSNAKNGDTPGFASAGQRARALHAAACRGADPPLAIPLPHTAAISKLRDTA
EGVGMSATDWPRGCLGYAVNLVRPTHKGHRANVLFSQLSNMLVFETLQDAEEYKEFLSQK
LRIGTGMFLSLDGRRIMANGVVSGASFQVPALEKADMRFGSSGALGENPAAAQAAEQEQA
EQVEAECRSELESVEVQIAELDAQLALGDIAAGGGAAAGGQTGRKKRGRRQQQQEEEEVV
VVEESDEQHNHAGQPIKRRRRTAA
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgctgccgcctactgctgccgggcgtcggcgaggcgtgcgtcccgctgcca
atcagctgccaggcgctgcgcaccgctgcgctccagcactttggggcggcgctgcccgga
gaggattttgtgatcaccgacactctggagacctttgaaagcgacgcagacatgcagcgc
attcgcgatggcgccacactggttgtcacgtctgctgccaaccgtgcgctggcggcgccc
gcttccgagcgcatcagcttccagccccatcccaagacgctgaccatggccggcgagttt
gagtactttgcagcccagggccgtcacccctttgtgtatgcgctggccgagtttgtggac
aacagtttgcgggccacgcgccgcactgcgccccacccacgctctatcaccgtctcgctg
gtggtctccggcaacaaccccgccacagcacgtggcctggtggccatccaggacaatggc
tgcggcatgaacaaacttgagctgacagactgggcggtgatgaacctgagcatggaggag
cgcggcgcggcgccgcaggagccgcagccggcggggcgcgggggcggcggcgcggcgggc
gcccctggcgccggccgcttcctcactggcgacctctccttctttggcgttggctcaaag
aatgctggattctttatgggctcctccatcaaggtggccaccaagcgggcagatgagctg
tacgtgcacgagctgcgcctggcagccgccgacctggagcagcggtaccagaaccgcgag
gaagtctatgtggaggaaatgatccaccgcaacccagcagacccctccaccctgtcatcc
gcggagcagcccttcagctgtgcgcgtacctgggtggcggcggagggcgaggatgccgag
gccggcggcactgggcccagcttcactcgtgtggtgattagcgacttaaaaccagatgtg
cttcgccagatcatggccgatgagcagggtacccacatctgccaggagctggcacacttg
taccactactacctgcatggcgagcagggcaaccgttccggcggcagcaaggcgatgcgc
gaggggcggctgcccaacggcgagcccttccccgaaattgtgctgcggtaccaggttgac
tcgcgcattgtgtggcagcagcggctggctgaggtggaggacgacttggagacgcggctg
ctgcgggcgcagcaggccgagttgccattcacactgcaaggcacagtatgcggggtgctc
tactacttcccatttcaaaatgaccaggagacggtgccggtggaaaacccgctgacctcc
tccaagccagccaccagcccctttggccctggtgcccgtgccacccagctgggtcccacg
cagctgcagccacggggtacgcagcacctgccgcatcgcgcaacgcaggcgccacgtggc
acgcagctggtcggcggggcagcagcagcagtcggcgggctggatgaggaagaagacgag
gaggcgcagggcggctggcagtcggtccccatctttgaggcattctggcagggccgcctc
atccctggcgcccgcattgacaccctgcccttcctggaggccgacatgatccctgacgag
gccttccgccgcctgcgtggcgcgctcttcttcggccctgccttccgcgtcaccaggaac
aagttgttgtttagagattctctgcccgaggtgctggccacggcagtgccgggggagcgc
cagatggaggccaagttgcggcagtggcttcagcgctgccactccacactggacaagtcg
gtgcgatttgagacgctggccgactcgcgcacacagtctgcgctgcgcagcaagctgggc
gaggagaccaccgcctttgacagcatcaccgatggcgcccacaccattagcaagggggat
gtggtgcgcgtcaatgccaagccgcaggttgtgggaagagtgctgtatttcaccattcct
caggctgtgcgtgaggagggcgcgtatgcaaacggccggctgcacatcgagctgatccct
gccgaggtgtacggcccgtcgtgcgagaagcagttcagtctgcggcgcctggaggcagtg
ctgagcgaggcggagcagcaggatcacctgcagaaggagctgctgagggcgcccacttcg
ctgcgcatcgatcccatgcggttttcgactgggcaggccctggagttcactgtcggcgac
acaatccccgaaactgcggcctcggtgctgagcggcagcgggcagcgcatgtccaagaca
gcattcactagcgagcgcttcttggtgacgcagcgcctatggcgcttgcctgccggcgct
gagggcctggctggaggggcgggagatgctgatgcagcggcggcggcggcgggagaggag
gaggagggcggtcgccgtgccgccaagaggcagcgcaagggccggaagggcaagggccgg
caggacgagaatgccgaccctgtggcagccgcggcggcggcaggtgcaacagagtgcaac
ggcatgccgccaggggcggagttgatgctgactgtggagaacaagacgccattgaaggac
actttccagtttgctcgcattagtgacggcctgcatcgcttcagcctgtcgggcgaaggc
aaggctgtgacagctttgaaggacattgcgctgggcgaggcgctgccgccaatcaaggtc
atgttcagcgaccggtttggcaacccggtggccatgcagcccacgcagacgcctccctgc
ctcagcattgccgctctgacgactgggccgctgggagagctgcagcaatgtgaggagctc
caggtggtggcacagcaggcggcggcagaggatggcctgctcatcaccgacctgcagctg
ctgggcagcgaggtggtggccagcgggcccgaggcgcctgggcttcagctgctggccagc
ggcgatgggctgtcgcatcccacaggccgccaggcccaggtgcagccctccaagcagagc
ctgccagcagcagaagtgcagctgagcatcagcctgcagggcagcgcggagctggagtcg
gtgaaactgccgttgcgcttgcgagcgggagcaccgcagtgcctgcggttgctacctggc
cacccatgggaagcagcacaacaggatggcggcgcaggagtggtaacgctgcagagcgga
ggcagcctggcggcgttccaggttgtagtctttgacgcctggggcaaccccactgcccca
tctgccgacttggggtttacagtgctggcagagtgccaggccacgggaccgcaggccaga
gaatttacccccagtggaggaggcatcaccactgttgagggtctagttggcgtcagctcc
actggcgccagcgggcccgccaccttcaaactcagcttaaagagctacccctgcaatgcc
agcaccgaggcagcagtggcggtggcagaccccaccaccgctctgaccttcccgctggca
gtggagccctcaatgatgccgaccagcatccaggtgctgcgggatgggcagccgctgccc
actaaggaggtgcaaggcgacgatgggccgatcacagtggcgctgctggacgatgtgtcg
gcaggcagctcagttgtgggcctgtgctttgtgcttctggacgaggggggcaccccggca
gcacagcagctgacgggcaaagtcactctgtcatggaagagcggcagcaagaagttcacc
tgggatggagaagggttcaagctgccccctgtcaaggtgccagagtcggttgcaaatgag
tccaaccagtggatgcgattcacgtccatcgacccagcagtaatgctggagatgccgctg
gagatccgcggtgtacctgccgagcctgccagctggacaatcagcatggtggaccaggtg
actagccagaacagtgaggttcttggcgtggtgcagtgtgggcagccgtttgcgttagaa
atggaagccatcgatgccttcaacaatagatgtggcggcggcagtgcggcgctgccattg
cctgggctgacgctggagagtgaggggccgctgcagtacaacgagcaggagtgggagcag
ggctgggtgtcacagggcggcgagcaggtgtacgctgtgcgcatgattgtgtctgggcac
ccggggcgtgtgaagattaccgtgcgcgacactgggggcgaaggcagcaactcacttctg
ggggaggacagcctgtttgtggagctgcgtgcagggccaccagcacagctggctgtggag
gggcctgccacccttgagtgcggcaccaagatggccatcccacagctgcgcgtgcgtgtg
tgcgattcggcgggcaaccccaccaccggcgaaaactttgaggtctccctgtgcagctca
gcattggccaccgacggaactggccgtgccgcctcagtgtcagtcagtggtggcaacaag
atcaagctgaagcagggcgttgcagtgtttaaagatgtgcgggtggtggcggatgaagca
ggaagctatgcgctgcgggtgcagggtgccagccgcaaagtggcggtccaagacgctgtg
ctgcaccttatcatgcagcagctcaatgcggtgacaaacttgcgggtgctgctgtcagag
gtgttggagagcagcagctgccaggcgggcacctgctctgagctgcatgtggcggtgatg
acggagaatgggctgtcgctgccgcccgaggtggcggttgccagcctggccttgaaggtc
tcgccgccaggcggcggcaagaatgatgtcgtgagctacatgctgcctgccccagagcag
cccgatcagccagttgagctgcaaacagaggatgggcactatgtcttccagctgccagag
ctgacggcggcaggcacttacactgccgtggccgagtatgcggaggcgcggcccgacttg
gcagcagggctgtccaacaaggatgccaagctgcgcagtgccagcgtgcgctttgaagtg
catccgtgccagcccgtcaccatgaggctggaggcggcatctctgcccgagaaggtggct
gtgactaatggcagcagtggcaaacagcggctgattctccgcaatgcggcagtgcagctg
caggacgtctatggcaatgcggcaggcgcttgcggtgtgcaggtgcggtgtcgcctgcgg
ctcccaactggcgccgctgcagacagctcctcgcacctgccggagctgcagagtggccac
gacttggcccctcaggagacggatgagcggggcagggcattcctgggggacttgtccatt
gcagagggctcaggccatgccgccagtggcgccctgcagtgcgagttggtgtgcgaagcg
ctgggcctgtaccctagttcagcacatgagttggagacagatggcgatggctgggctgtc
tgctggagctgtccggtgctgttctccgatgatgcagccaggtttgcacacattgagcgc
ctaaaccagcagcgcggcgagctggcgcagcggcgggaggagctcaacctgcgcatcagc
ggcgcgcagcaagccttggccgaagcgcaggagcggcagcatcaggcgcagcaggccatg
gccagcaaggaggaaggcttgcctgcgcctgcgcccaacacccttaatgcagctaagaag
cagctggccgctgcacggcgacaggccgaggcagcagctgtggaagagcctgaggatgtg
gtggaggcgcgatacggcaaccccaagagcaccctgacggcctcgattgataggatcctg
cagtcaggcgaccccggtttggtaggcgtggttgcgcagctggccaccgtggatgacaag
gccctgtcagcagtgctggttgctgcgtgccgcagtcagctggccacagttgtggtacag
gacataccggcgcggcagcgcgtagcggccatgctggtcaagatggattaccctgtgcca
gacatgctgccagcaacgatgatgttggggtcaaacgccaagaatggagacacgcccgga
tttgccagcgcggggcagcgcgcacgcgccctgcatgctgctgcgtgccgtggagccgat
cccccgctggccattccactgccacacacggccgccatcagcaagctgcgggatacagcc
gagggtgtgggcatgtcggccacagactggccacgcggctgcctagggtatgctgtcaac
ctggttcgccccacacacaagggccatcgtgccaacgtcctgttcagccagcttagcaac
atgcttgtgtttgagacgctccaggatgcagaggaatacaaggagtttttgagccagaag
ctgaggattgggacgggcatgtttctgtcgctggatggtaggaggatcatggccaatggc
gtggtcagcggtgccagcttccaggtcccagcactggagaaggcagacatgcggtttggg
agcagcggcgcgctgggcgagaatccagcggctgcgcaggccgccgagcaggagcaggca
gagcaggtagaggccgagtgtcgcagcgagctggagagtgtcgaggtccaaattgcagag
ctggatgcacagttggccctgggtgatatcgctgccggtggcggcgcagcagcaggaggc
cagactggacgaaagaagcggggcaggcggcagcagcagcaggaagaggaagaggtggtg
gtcgtggaggagtcggacgagcagcacaaccatgcgggccagcccatcaaaaggcgccgg
cgcacggcggcttag
DBGET
integrated database retrieval system
