KEGG   Chlorella variabilis: CHLNCDRAFT_139944
Entry
CHLNCDRAFT_139944 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
cvr  Chlorella variabilis
Pathway
cvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLNCDRAFT_139944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_139944
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CHLNCDRAFT_139944
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_25 AAA_29 nSTAND3 AAA_28 AAA_23 AAA_16 NACHT Zeta_toxin AAA_5 AAA TsaE PduV-EutP SMC_N
Other DBs
NCBI-GeneID: 17351127
NCBI-ProteinID: XP_005843796
JGI: ChlNC64A_1_139944
UniProt: E1ZR93
LinkDB
Position
Unknown
AA seq 301 aa
MTASPPLAAIASVAAGDTPDSVVVRCLSFSFPFSPPVIHDLSLELPRGSRCLLTGANGAG
KTSLLQVLAGKYMVGQDTVRILGRPAFHDIQLVASGDLSYLGPQWRRDIAFAGNNVPMQG
DIAAGQMLMGVEGVDPERRDRLIKLLDVDLSWRLNKVSDGQRRRVQICMGLLKPYQVLLL
DEITVDMDVVGRLDLLAFFTQECEERGATIIYATHIFDGLESWPTHFAYLEGGRAVRGGP
VSGIPELHTGSKLLHVVEGWLRQEKAERRRRQAAAGEQAAAPVAPRISHPLMPSKHMAFF
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaccgcctcgccgccgctggccgccatcgcgtcggtggctgcaggcgacacgccggac
tctgtcgtcgtgcgctgcctcagtttctccttccccttcagcccccccgtcatccacgac
ctcagcctggagctgccccgcggctctcgctgcctgctgacgggcgcaaacggcgcgggc
aagacgtcgctgctgcaggtgctggccggcaagtacatggttgggcaggacacggttcgt
attctcgggcgccccgctttccacgacatccagctggtggccagcggcgacttgagctac
ctggggccgcagtggcgccgcgacatcgcctttgccggcaacaacgttcccatgcagggc
gacattgcggcggggcagatgctgatgggggtggaaggcgtggaccctgagcggcgggac
aggctcataaagctcctcgatgtcgatctgagctggcggctcaacaaggtgtcggacggc
cagcggcggcgcgtgcagatctgcatggggctgctcaagccctaccaggtgctgctgctg
gatgagatcacggtggacatggatgtggtggggcgcctcgacctgctggccttcttcacg
caggagtgcgaggagcggggcgccaccatcatctatgccacccacattttcgatgggctg
gagagctggcccacgcactttgcctatttggaaggcggcagggcggtgcgaggtggccct
gtcagcggcatccccgagctccacacgggcagcaagctgctgcatgtcgttgagggatgg
ctgagacaagagaaggcggagcgtcggaggcggcaggcggcagcgggcgagcaggcggcg
gcaccggtcgcgccccgcatctcccacccgctcatgccctccaagcacatggcattcttc
agatag

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