Cellulomonas wangleii: KG103_05850
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Entry
KG103_05850 CDS
T08575
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cwan
Cellulomonas wangleii
Pathway
cwan03030
DNA replication
cwan03410
Base excision repair
cwan03420
Nucleotide excision repair
cwan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cwan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KG103_05850 (ligA)
03410 Base excision repair
KG103_05850 (ligA)
03420 Nucleotide excision repair
KG103_05850 (ligA)
03430 Mismatch repair
KG103_05850 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cwan03032
]
KG103_05850 (ligA)
03400 DNA repair and recombination proteins [BR:
cwan03400
]
KG103_05850 (ligA)
Enzymes [BR:
cwan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KG103_05850 (ligA)
DNA replication proteins [BR:
cwan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KG103_05850 (ligA)
DNA repair and recombination proteins [BR:
cwan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KG103_05850 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KG103_05850 (ligA)
MMR (mismatch excision repair)
DNA ligase
KG103_05850 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KG103_05850 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
QVI63399
LinkDB
All DBs
Position
1266884..1269379
Genome browser
AA seq
831 aa
AA seq
DB search
MSDVTPATPEHDVPAEARHRWTELAEQVRADQFAYYVRDAPTSSDAEYDERMRALERLEE
EHPGLRTPDSPTQRVAGTFSTDFTAVEHVQRMLSLDNAFSREDLVAWSERVHRDLETTAR
LDYLCELKIDGLAIALLYEKGRLVRAATRGDGRTGEDVTLNVRTIPTIPDVLAGDPATHP
DLIEIRGEVFLPVEAFRALNEAQVAAGKAPFANPRNAAAGSLRQKDPRVTATRPLRMYAH
GIGALTWGQGRGTGIARQSQVYDLLAGWGVPTSTHTRVVGSLDEVWERVAYFGEHRHDVE
HEIDGIVVKVDDIALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIEVGIGRTGRATPFA
VMEPVLVAGSTVRQATLHNQDVVRAKGVRVGDMVVLRKAGDVIPEIVGPAPQAPGDDVPR
VEWHMPADCPECGTPLRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGEVT
AAALTQPEVPETPPVPNEAYLFDLVGYGPDATPDEVDRVRTASLARLAEVEVVVRDAETG
LPKEDEDGTLRRRTPFRRTLKHTRAQRAAAEAEGRTLPDWEPSEAARTLLDQLDLAKTKE
LWRAIVALSIRNVGPTAARALAQEFGSMAALREVVDPDAGAGAGADDGARQDALDLEVAS
GPDGDGGTVPDPRAARRAAAVERLAGVEGVGPTIAQSLLDWFAEPWHREIVDRWAAAGVV
MADAADDSVPRTLEGVTVVVTGSLDGFSRDGAKEAILVRGGKASGSVSKKTDFVVVGENA
GSKETKARELGLRILDEAGFEALLAGGPAAVAPADDATGPGAEGSADGDGA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgtgacccccgcgacccccgagcacgacgtcccggccgaggcccgccaccgc
tggacggagctggccgagcaggtccgggcggaccagttcgcgtactacgtgcgcgatgca
ccgacgtcgtcggacgcggagtacgacgagcggatgcgtgccctcgagcgtctggaggag
gagcacccgggcctgcggacgccggactcgccgacccaacgcgtcgccggcacgttctcg
acggacttcacggcggtcgagcacgtgcagcgcatgctctcgctcgacaacgcgttctcg
cgcgaggacctcgtcgcgtggtcggagcgcgtgcaccgggacctggagaccacggcccgg
ctggactacctgtgcgagctgaagatcgacggcctggccatcgcgctgctgtacgagaag
ggacgcctggtgcgggcggccacccgcggcgacggccgcacgggtgaggacgtcacgctc
aacgtccgcaccatcccgaccatccccgacgtcctcgccggcgaccccgcgacgcacccc
gacctcatcgagatccgcggcgaggtgttcctgcccgtcgaggcgttccgtgcgctcaac
gaggcgcaggtcgccgccgggaaggcgccgttcgccaacccccgcaacgccgcagcgggc
tcgctgcgccagaaggacccccgcgtgacggcgacgcggccgctgcgcatgtacgcgcac
ggcatcggcgcgctgacgtgggggcaggggcgaggcaccggcatcgcgcgccagtcgcag
gtctacgacctgctggccggctggggcgtgccgacgtcgacgcacacgcgcgtcgtgggg
agcctggacgaggtctgggagcgcgtcgcgtacttcggcgagcaccgccacgacgtggag
cacgagatcgacgggatcgtcgtcaaggtcgacgacatcgcgctgcagcggcgcctcggt
gccaccagccgcgccccgcgctgggcgatcgcgtacaagtacccgccggaggaggtgaac
acccgcctgctggcgatcgaggtcggcatcggccggaccgggcgcgcgaccccgttcgcc
gtcatggagccggtgctcgtcgcgggcagcacggtgcgccaggccacgctgcacaaccag
gacgtggtgcgggccaagggcgtgcgggtcggcgacatggtcgtgctgcgcaaggcgggc
gacgtcatccccgagatcgtgggccccgccccgcaggccccgggcgacgacgtgccgcgc
gtggagtggcacatgcccgccgactgccccgagtgcggcacccccctgcggcccatgcgc
gagggcgacgtcgacctgcggtgccccaacgcgcagggctgcccggcgcaggtgcgcgga
cgcctcgagcacatcggctcccgcggcgcgttcgacatcgaggtgctcggggaggtcacc
gccgcggcgctgacgcagcccgaggtgcccgagacgcccccggtgcccaacgaggcgtac
ctcttcgacctggtcgggtacgggccggacgcgacgccggacgaggtcgaccgcgtgcgc
accgcgagcctggcgcggctcgccgaggtcgaggtcgtcgtccgcgacgccgagaccggg
ctgcccaaggaggacgaggacggcacgctgcgccgccgcacgccgttccggcgcacgctc
aagcacacgagggcgcagcgcgccgccgcggaggccgagggccgcacgctgcccgactgg
gagccctcggaggcggcgcgcacgctgctggaccagctcgacctcgcgaagaccaaggag
ctgtggcgcgcgatcgtcgcgctgagcatccgcaacgtcgggccgaccgccgcgcgggcg
ctcgcgcaggagttcgggtcgatggcggcgctgcgggaggtcgtcgacccggacgccggc
gcgggtgcgggtgcggacgacggcgcccggcaggacgccctcgacctcgaggtcgcgagc
ggacccgacggcgacggcgggaccgtgccggacccgcgggcagcccggcgggcggccgcg
gtcgagcggctcgcgggcgtcgagggcgtcgggcccacgatcgcgcagtcgctgctggac
tggttcgccgagccgtggcaccgcgagatcgtcgaccgctgggccgccgcgggggtggtg
atggcggacgccgccgacgactccgtgccgcgcaccctcgagggcgtgaccgtcgtggtc
accggcagcctcgacggcttcagccgcgacggcgccaaggaggcgatcctggtccgtggg
ggcaaggcctccggctccgtgtcgaagaagacggacttcgtggtggtcggcgagaacgcc
ggctccaaggagaccaaggcgcgcgagctggggctgcggatcctcgacgaggcggggttc
gaggcgctgctcgcgggcggtccggcggccgtggcgccggccgacgacgcgacgggtccg
ggtgcggagggctccgcggacggcgacggcgcgtga
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